Detailed information of Csp0G438820 in Chrysogorgia sp. JL179-B06

Genomic Location: Contig00795:11291978...11335935
NR annotation: no NCBI-NR hit recorded
Species Chrysogorgia sp. JL179-B06 · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13087
all species →
AAA_12AAA domainDomainInterproscan
PF00773
all species →
RNBRNB domainDomainInterproscan
PF13086
all species →
AAA_11AAA domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR012340
all species →
Homologous_superfamilyNucleic acid-binding, OB-foldInterproscan
IPR047187
all species →
DomainUpf1-like, C-terminal helicase domainInterproscan
IPR027417
all species →
Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR041679
all species →
DomainDNA2/NAM7 helicase-like, C-terminalInterproscan
IPR003593
all species →
DomainAAA+ ATPase domainInterproscan
IPR001900
all species →
DomainRibonuclease II/RInterproscan
IPR045055
all species →
FamilyDNA2/NAM7-like helicaseInterproscan
IPR041677
all species →
DomainDNA2/NAM7 helicase, helicase domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10887
all species →
DNA2/NAM7 HELICASE FAMILYInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0016887
all species →
Molecular FunctionATP hydrolysis activityInterproscan
GO:0003723
all species →
Molecular FunctionRNA bindingInterproscan
GO:0004540
all species →
Molecular FunctionRNA nuclease activityInterproscan
GO:0005829
all species →
Cellular ComponentcytosolInterproscan
GO:0035194
all species →
Biological Processregulatory ncRNA-mediated post-transcriptional gene silencingInterproscan
GO:0043186
all species →
Cellular ComponentP granuleInterproscan
GO:0004386
all species →
Molecular Functionhelicase activityInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for Csp0G438820.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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