Gene detail

Detailed information of Csp0G447250 in Chrysogorgia sp. JL179-B06

Genomic Location: Contig00809:954573...998160
NR annotation: no NCBI-NR hit recorded
Species Chrysogorgia sp. JL179-B06 · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Csp0G447250

ATGGATGTAGAGACTTTGCGCCTGGAACGCGAAGAAAAACGAAGGCTAAGAAGAGAAAGGATTCGTCGAATTTTGGAGGATGATGGATCCCCTTCGAGGCTGTCCAGGCTAGAGAAAGGCGAGAAAGGCAAGGAGTCACCCCCCAGCCAAAAAAGCGCTGAAAAAAATGGCAAACGCCAATCCGACGTCAAGTCCGACAAGTTGAGCGAAACGAAGGAAGAGCGAGCAGTGACTCGTAAACAACGGCTAACCGAAAGGTCCTCGAAAACTGCTAGAGATGTGCACACTTCCGAGACGAATGTTAAACGATATATCGACGACGGCAACCTAGACAAAAATGATTCAGAGAAAACGCAAGACAAAAAGAAGGAGAAGGAAGAAGGAGATGAGGTCAAAAATCTGGATGATGAGAAAAACGTCGAAGAGACCAAAGAAGTGGACGAAATAGAAGAGGATGCTGAAGTTAAGGGAGAGGCTGAGGGAAAAAGGAAAGAAGGAGAAAGTGTGGAAAACGAGGACGACGTCCTTCGTACAACAACCTCAATGGAGAATTTGCAGAGTGATTCGTTACAGGACGTAGTGGCTGTTCAAACATCAGAAGAAACATTAGAGACGGACGTGGCGTCTGTTGTTATACGCGAATCGAACAGAGGAGAGAAGGAACTGTCGAAGGAAGAACGTCAGTGTAACGTTGACGAACCAGGTGGTGTTTTGAAGAGTCAGTTGACCGATGATGTAAATCATCATTCGTCCAGTGACAAGGCAATGCAAGATTTATCCAGAGACAGTGTAATGCAAGATTTATCCAGAGACAATGTAATGGGAGATTCATCTAGAGACAGTGTAAAGCAAGATTCACCCACAGACATTGTAGAGCAAGATTCATCTAGAGACAATGTAATCAAAGATTCATCTACAGACAATGTAAACCAAGATTCGTCCGGAGACAACGTAATGAAAGATTCATCTACAGACAATGTAAACCAAGATTCATCCAGAGACAATGTAATGGCAGACTCATCTACAGACAATGTACATGTAAACCAAGATTTATTCAGAGACAATATAATGGCAGATTCATCTACAGATAATGTAAACCAGGATTCATCCAGAGACAATATAATGGCAGATTCATCTAGAGACAACGTAAACCAAGATTCGTACAGAGACAATGTAATGGCAGATTCATCTACAAATAATGTAAACCAGGATTCGCCCAGAGACAATGTAATGGCAGATTCATCTACAGATAATATAAACCAAGATTTATCCAAAGACAATGTGATGGCAGATTCATCCACAGATAATGGAAACCAAGATTTATCCAGAGACAATGTAATGGCAGATTCATCTAGAGACAATGTAAACCAAGATTCATCCAGAGACAATGTAAGCCATGATTCATCCAGAGACAATGTAAATCAAGATTCATCCGTAGATGGCGTACAAGACGTAACGAGAAATAAATCTTCAGCAAACATTTCGAACGAGGTTGCCGATAGTGTTTCACTTGAATCACGAATTAAAAGCGACCTGTCTTCTGAAAAATCCAGTCCGAGGCTACGCCCAACCAGCCCGAAGAAAACCGTTGGAGAAACGACCGCAGAAAAGTCTGCGACGAAGCACGACAGGTCTGCTCGAGTTGGTGAACGGAAAGGCAGCGATGAGTCGTGGCAGAAAAACGCGCGAAAAAAGAAAACGGTTGCCGATAGGGACAGACAGGTGGAATTGATGGTGCTGGGGAGGACGGGGAAAATAAGGGATAAGTTGAAGACGTGCGAAACAAGGGAAGGTTCTGATACGTGGGAGAATGGAGCGAAGAAGGGAGCACGGAAGAAAAAATCACTTGACGAAGACACGGAGAAGGAACTCCAGGAGTTGTCTCGAAGGCGTGACTTGAAGAGCCGTGTTAAGGAATGCGAGGAACAGGACAATGAGAGTGCCGAGGCGTGGAAGAGAGAAAGAGAAGTCAAAAAAGACGTAAAGAAACACAAGTCACTCGATGAAGACACTCAGAGCGAGTTGAAGGAGTTGTCGAAGGGCAGTGCATTGAAGAGCCGTATCAAGGAGCGTGAAGAGAAGGACAAGGAAAGTGCCGAGGCGTGGAAGAGAGAAGTAAAAAAAGATGTAAAGAAACACAAGTCACTCGACGAAGACACAGAGAACGATTTGAAGGAGTTGTCGAAGGGCAGTGCATTGAAGAGCCGTATCAAGGAACGTGAGGAGAAGGACAAGGAAAGTGCTGAGGCGTCGAGGAGTGAAGTCAAAAACGATGCAAAGAAACACAAGTCACTCGATGAAGACACGGAGAGCGAGTTGAAGGAATTGTCGAACTTGAGTGATTTGAAGAGCGAGATTATCAACTCGTGCGAAGAGAGGGACAAGGAGAGCGCTGAAGCTTCAATGAATCGGATAAGATCGAGCGAACGCGAGAAATCATTTGACGAAACTCAAGAAGAAGAACTCAAGCAGTTGTCGATAGCTGTTGACGTGAAAACTCGAATTCAGTCTAGAATTGAAGAAAACGAGAAACCAAAAGAAATACCAAAGCGACCTGATCCGACTGACGAAGGGGAACTCGGGGAAATTAACCTCAATAGTAGACTCGACTACAAGCAGGAGAGTGAGAAATTGGAGCCCGACAAGAAGAAGCTTGAAGACACGGGAAATGCTGTGGGGATCCCACCGACTATGGGGGACACACAGGATATAACGTCGTCCACGGATGAAGATTCGTTGCCACGTGATACTGCCGAGAAGTCGAATGAACAATGCGGTGGTGAGGTCTTAGGTGAAACTAAATCCGGGATAAACCAAACACACGAGACTAAAATTATGGATACAAAGGGACCAAACAAGGATGATACTCGTCGTGGTAGGACATCGCCGATCAAGCAGGGTAATAAGGATGATGGGCATGGTGGGAGGACATCACCGGCTATGCGGGATAATAAGGATGATGGGCATGGTGGGAGGACATCACCGGCTAAGAGGGATAATAAGGACGAGGGGCCTGTTGGGAGGACATCACCGGCTATGCGGAATAATAAGGATGATGGGCATGGTGGGAGGACATCACCGGCTAAGCGGGATACGAGTGGTAGGGACTCTCCTACTAAGGACGATGGACATCATGGTACCAAGGACAGGATATCGTCGGCGAAGCGGGACACGAGGGGACGAGTTTCACCTACGAAGGATAATTTGAGTACCAAATCAAAACTGGAAAACATTCGATCGAACCTGTACGACGGATCGAAAACTAAGACGAAGAATAAGCGGGAGAGTTTGGACGGACTTTCCAAAACGGTCAGCATCAAAGACAAGATATCAGCTTGCAAAGAAAGGGATAAAATGTCGCCACGACCGGTGCCAGTCGAAAAGACGCCGTCAAAAGTGAAACCAACGGCGGTGCCTGATAATGACACCCCTAATGCAGGGATGGGGGAAGTGAAACTGCAGGCTGCGGGTAATGCCGCGGGTGAGGCGAGTCTTAAGATTCCTGTTAACCACATGGGCGATCAGTTTGTTTCCATCGAGGAAGAAACGAAGGACGCAAGCATCAAGGATGCTCTGTCGTTCTGGCAGCAGCCTGGGGCCGAGAGGAAACCCGGAGAAACCGAGGTCGCGGATGACCGCGAGGAAGAAGTTGTCGACGTCGATCTCAAAGGCAGGATGTCGTATTGGGAGTCGCCGAAGCGGAGCGACGAGGATACGGGAAAATGGCAGAAGAGAAGCAGGAAGTTGAACACTGGTGAGTTCATCGAGGAGCTTCTCAACGCGAAGTGCAAAAGACGCGAGCTGAAAGATATCCGTGACGTGGAGTCGGATACGAAGAAATACTTGGTGATCAAAAAAGACGAGGGAGGAGTGGGAGAGTCAAGCGTGAAGAAGGATGGGGATTTTAAGAAACCCGAACTGGTGGAGAAAAGCGTCGAGGAAGAAAATAAAAAGAATAACAAAATGGATCCTGGCGAAGGGACTGAAAAGATCTCGGACGATTTCTCGTTCGACGATGTTGTCAATCCAAACGAAGTGAAACAACTTCGTGGTTTCTCCGACTTTCGTCGTCAAGTGAGGCCCGCAAACCGGCGTGCTGCCAAGTCGAATCCTGTACGAAAACTTCAACAACGCGAAGACCTGAGGACTGGATCTGACTTATTCAGTGAAGATTATGACGAGGAAGATTCCCCTCCTAAACGGACTGCCGTTGGACGTCTAGGTCGACCTATAGAACCAGGAGATCGAAAATCTCGAGAAATAAAAACGTTCGCCAAAGATGCATTGGCTGGGTTGTCCGCCAAAGAAGATGTTTCGAAAATAACGTTGAAGAAAACGGCCAAGTCGAAGAAAGGAGTGAGTCAGGAGAAAAGTGAATATGATGGAACGGCCCCAGTTATGCTGATGCAAATTAAAGGTCACCGTCATATGCAAACCAGATTAGTTGAACCAAGTACTGAGTCGTTGAACTCTGGAGACGCATTCGTGTTGGTAACTGCGAAATATATTTTTGTTTGGTTGGGGAAAGATGCCAACGTTATGAAGAAATCCAAGGCATCTCAGCTGTCCAACAAAATCCTTCAGTACAAGCTGCTGAACTGCAATGCATGCGTGATCACCATAATTAAAGATGGAGATGTAAACATTGAAACTGCACTCACACGATCTTTTTGGAACTTGTTAGGCGGAAAGAAACCCGTGAAAAGTGGTAAACAAGTGCCAAACGATCACGATTATGAGAATGGCGTCGTGTCATCTAATACAATATTTGCTGTGGACACAAGCAGTGAACCAGCGAAACTAGAGAGACATTCTGAATTGTGTGCAAAGATACCCAGCATAAAGATGTTGAATTCAGACAAGTCGTTCATATTTGATTTTGGGACCGAAGTATACCTGTGGCTTGGTAGAACCTGCGACAAAGCCACGAGGACTCAGGCCGTCGACTTAGCTCAGGGCGTCTTCAAGGGAAAATTCAAAACGAAAAATTCACTCAATCCCATCTCTCCAAATGCTTCTTCCGATGGGAAATCCTTGGAGCTTAAGCGGCCGTCATGGGCTGTGTTTGGCCGTATGACAGAGAGAGCGGAGACGATCTTGTTTGAGCAAAAGTTTTCTGACTGGCCGGATGCTGCTACGAAGGCGAAACTGGACAAACAGAAGGATTTGTTGAATAAGAATCTAAGCAGTGGATATGCCAAGAGGAAAGTCAAAATGGAGGAAGTGGAAGTACAACTGGTGGAGCTCGTGCCTTACGATGGCGCAAAAATGTCCAAAGAGCCCCCTCCAGTGACGATGATGCTCGAAGGAGTTGACGTCGGTCGTGGTAGGGGAAGCTACGACGAGATCGAAAGACGGTCACAGATAGTCAATACAAACTCCGTCACAGTTTATCACAGCTCGGAAAAAGAATACAGACAGCTTGAAGAGAAAGAGTGGGGACATTTTTACTCGGCAGAAAGTTATGTGATCAGGTGGAGTTACTCCGTGAAAGCTTCAGGCATTCGTTCTTTGAAAGGCGGTGATTCCAAACACGAGACGATTGGACGAGATCAGATTGCGTATTTCTTTTGGCACGGAAGGGATTGCTCCGTGAGCGGGAAAGGAACGTCTGCTTTGGCGACCATTGAATTGGATTCGGATAAAAGTCCACAGATCATGGTAGATGAAGGGAACGAATCGGCATGCTTTTTAAACATGTTTGATGGCCAAATGATTGTCCATCATGGAAAATCAAACGAAACACAGTCCATTGTGGAAGATAACGTATTAATGTATTGCGTTCAGCATGAAGATGAACGGGAGATAAATCTAGTGCAAATCGAAGCTAGATCATCGAATTTAAGATCGCGTTCATCGTTCATTGTCGTCGTTATCGGGACGTCGATCGGCATTTGTGTCTGGCATGGTGCAAAAGCGAGCAAAGAGAAGAAGGAGGGTGCTTTAAGAGGTGCAAAGAGATTGGCAGTGTGGTTTAAAGATCTTTTCGATGTTGATAAGTTGGACATTGTCGAACTGGAGGAAGGCAATGAAGGAGCCTTGTTTTGGGAAGCACTTGATGGAAAACACGATTATGGATCTTTAGTTCAATCTGAACGCAATTGTGATTATCGCGTGAGGTTGTTTAACTTCACAAGCACCGAAGGACCATTTGTTGCCAGAGAGATCCTTAATCCTACGAGAGGAGATCTTGTCTCGCCTTATCCATTCCGGCAATCGCATCTCTATTCTTCGTCGCAACCAACGTTGTTTCTTCTTGATGCCGTTCACGAGATGTATCTTTGGCAAGGATGGTGGCCAGTTGACCCAGAGGAGTCTGATGCCTCTGCGACTACTACAGGTTCCGCTGAGTTCATGTGGCACAGGGACAGAAAACTAGCCATGCAGACAATACAGTCTTATGCTGACATTGTCGGTCGTCAGATGTCCAAGTCGTACGTGGTGAATGCTGGTTTGGAGCCTGTGGAGTTCCGCGCTTTCTTTCCTTTTTGGGAACAGTATCCTGATGTGGAACGGCTCAACTTGGAGAGTGGAAAACTGGATGGCGGAAAGTCCTCTTTACCAGAACTTCTTACCAAGTTATCCAGAGATCGCTACACGTTGGCCGAACTACTCGTCAGACCTTTACCGGAAGGAGTGGACCCATCCAAAATGGAGGTGTATCTGTCTGATGACGAATTCAAGGAAGTATTCAACATGAAAAAAGACGAGTTTTCGAAGCTGCCTAAATGGAAAAAGCTAGAACAAAGAAAGAAAGCTGGGCTGTTCTGA

Transcript

Csp0G447250

Protein

Csp0G447250

MDVETLRLEREEKRRLRRERIRRILEDDGSPSRLSRLEKGEKGKESPPSQKSAEKNGKRQSDVKSDKLSETKEERAVTRKQRLTERSSKTARDVHTSETNVKRYIDDGNLDKNDSEKTQDKKKEKEEGDEVKNLDDEKNVEETKEVDEIEEDAEVKGEAEGKRKEGESVENEDDVLRTTTSMENLQSDSLQDVVAVQTSEETLETDVASVVIRESNRGEKELSKEERQCNVDEPGGVLKSQLTDDVNHHSSSDKAMQDLSRDSVMQDLSRDNVMGDSSRDSVKQDSPTDIVEQDSSRDNVIKDSSTDNVNQDSSGDNVMKDSSTDNVNQDSSRDNVMADSSTDNVHVNQDLFRDNIMADSSTDNVNQDSSRDNIMADSSRDNVNQDSYRDNVMADSSTNNVNQDSPRDNVMADSSTDNINQDLSKDNVMADSSTDNGNQDLSRDNVMADSSRDNVNQDSSRDNVSHDSSRDNVNQDSSVDGVQDVTRNKSSANISNEVADSVSLESRIKSDLSSEKSSPRLRPTSPKKTVGETTAEKSATKHDRSARVGERKGSDESWQKNARKKKTVADRDRQVELMVLGRTGKIRDKLKTCETREGSDTWENGAKKGARKKKSLDEDTEKELQELSRRRDLKSRVKECEEQDNESAEAWKREREVKKDVKKHKSLDEDTQSELKELSKGSALKSRIKEREEKDKESAEAWKREVKKDVKKHKSLDEDTENDLKELSKGSALKSRIKEREEKDKESAEASRSEVKNDAKKHKSLDEDTESELKELSNLSDLKSEIINSCEERDKESAEASMNRIRSSEREKSFDETQEEELKQLSIAVDVKTRIQSRIEENEKPKEIPKRPDPTDEGELGEINLNSRLDYKQESEKLEPDKKKLEDTGNAVGIPPTMGDTQDITSSTDEDSLPRDTAEKSNEQCGGEVLGETKSGINQTHETKIMDTKGPNKDDTRRGRTSPIKQGNKDDGHGGRTSPAMRDNKDDGHGGRTSPAKRDNKDEGPVGRTSPAMRNNKDDGHGGRTSPAKRDTSGRDSPTKDDGHHGTKDRISSAKRDTRGRVSPTKDNLSTKSKLENIRSNLYDGSKTKTKNKRESLDGLSKTVSIKDKISACKERDKMSPRPVPVEKTPSKVKPTAVPDNDTPNAGMGEVKLQAAGNAAGEASLKIPVNHMGDQFVSIEEETKDASIKDALSFWQQPGAERKPGETEVADDREEEVVDVDLKGRMSYWESPKRSDEDTGKWQKRSRKLNTGEFIEELLNAKCKRRELKDIRDVESDTKKYLVIKKDEGGVGESSVKKDGDFKKPELVEKSVEEENKKNNKMDPGEGTEKISDDFSFDDVVNPNEVKQLRGFSDFRRQVRPANRRAAKSNPVRKLQQREDLRTGSDLFSEDYDEEDSPPKRTAVGRLGRPIEPGDRKSREIKTFAKDALAGLSAKEDVSKITLKKTAKSKKGVSQEKSEYDGTAPVMLMQIKGHRHMQTRLVEPSTESLNSGDAFVLVTAKYIFVWLGKDANVMKKSKASQLSNKILQYKLLNCNACVITIIKDGDVNIETALTRSFWNLLGGKKPVKSGKQVPNDHDYENGVVSSNTIFAVDTSSEPAKLERHSELCAKIPSIKMLNSDKSFIFDFGTEVYLWLGRTCDKATRTQAVDLAQGVFKGKFKTKNSLNPISPNASSDGKSLELKRPSWAVFGRMTERAETILFEQKFSDWPDAATKAKLDKQKDLLNKNLSSGYAKRKVKMEEVEVQLVELVPYDGAKMSKEPPPVTMMLEGVDVGRGRGSYDEIERRSQIVNTNSVTVYHSSEKEYRQLEEKEWGHFYSAESYVIRWSYSVKASGIRSLKGGDSKHETIGRDQIAYFFWHGRDCSVSGKGTSALATIELDSDKSPQIMVDEGNESACFLNMFDGQMIVHHGKSNETQSIVEDNVLMYCVQHEDEREINLVQIEARSSNLRSRSSFIVVVIGTSIGICVWHGAKASKEKKEGALRGAKRLAVWFKDLFDVDKLDIVELEEGNEGALFWEALDGKHDYGSLVQSERNCDYRVRLFNFTSTEGPFVAREILNPTRGDLVSPYPFRQSHLYSSSQPTLFLLDAVHEMYLWQGWWPVDPEESDASATTTGSAEFMWHRDRKLAMQTIQSYADIVGRQMSKSYVVNAGLEPVEFRAFFPFWEQYPDVERLNLESGKLDGGKSSLPELLTKLSRDRYTLAELLVRPLPEGVDPSKMEVYLSDDEFKEVFNMKKDEFSKLPKWKKLEQRKKAGLF

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF02209 all species →	VHP	Villin headpiece domain	Domain	Interproscan
PF00626 all species →	Gelsolin	Gelsolin repeat	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR003128 all species →	Domain	Villin headpiece	Interproscan
IPR029006 all species →	Homologous_superfamily	ADF-H/Gelsolin-like domain superfamily	Interproscan
IPR007122 all species →	Family	Villin/Gelsolin	Interproscan
IPR036886 all species →	Homologous_superfamily	Villin headpiece domain superfamily	Interproscan
IPR007123 all species →	Domain	Gelsolin-like domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11977 all species →	VILLIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003779 all species →	Molecular Function	actin binding	Interproscan
GO:0007010 all species →	Biological Process	cytoskeleton organization	Interproscan
GO:0051015 all species →	Molecular Function	actin filament binding	Interproscan
GO:0005546 all species →	Molecular Function	phosphatidylinositol-4,5-bisphosphate binding	Interproscan
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan
GO:0008154 all species →	Biological Process	actin polymerization or depolymerization	Interproscan
GO:0015629 all species →	Cellular Component	actin cytoskeleton	Interproscan
GO:0051014 all species →	Biological Process	actin filament severing	Interproscan
GO:0051016 all species →	Biological Process	barbed-end actin filament capping	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for Csp0G447250.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.