Detailed information of Csp0G448150 in Chrysogorgia sp. JL179-B06

Genomic Location: Contig00809:2506282...2509484
NR annotation: no NCBI-NR hit recorded
Species Chrysogorgia sp. JL179-B06 · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF12937
all species →
F-box-likeF-box-likeDomainInterproscan
PF04300
all species →
FBAF-box associated regionFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR007397
all species →
DomainF-box associated (FBA) domainInterproscan
IPR039752
all species →
FamilyF-box only proteinInterproscan
IPR001810
all species →
DomainF-box domainInterproscan
IPR008979
all species →
Homologous_superfamilyGalactose-binding-like domain superfamilyInterproscan
IPR036047
all species →
Homologous_superfamilyF-box-like domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12125
all species →
F-BOX ONLY PROTEIN 6-LIKE PROTEINInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005737
all species →
Cellular ComponentcytoplasmInterproscan
GO:0006516
all species →
Biological Processglycoprotein catabolic processInterproscan
GO:0019005
all species →
Cellular ComponentSCF ubiquitin ligase complexInterproscan
GO:0030433
all species →
Biological Processobsolete ubiquitin-dependent ERAD pathwayInterproscan
GO:0031146
all species →
Biological ProcessSCF-dependent proteasomal ubiquitin-dependent protein catabolic processInterproscan
GO:0061630
all species →
Molecular Functionubiquitin protein ligase activityInterproscan
GO:0005515
all species →
Molecular Functionprotein bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for Csp0G448150.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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