Gene detail

Detailed information of Csp0G456750 in Chrysogorgia sp. JL179-B06

Genomic Location: Contig00837:126379...139774
NR annotation: no NCBI-NR hit recorded
Species Chrysogorgia sp. JL179-B06 · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF07767 all species →	Nop53	Nop53 (60S ribosomal biogenesis)	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR011687 all species →	Family	Ribosome biogenesis protein Nop53/GLTSCR2	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR14211 all species →	GLIOMA SUPPRESSOR CANDIDATE REGION GENE 2	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0000027 all species →	Biological Process	ribosomal large subunit assembly	Interproscan
GO:0005730 all species →	Cellular Component	nucleolus	Interproscan
GO:0006364 all species →	Biological Process	rRNA processing	Interproscan
GO:0008097 all species →	Molecular Function	5S rRNA binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K14840	NOP53, GLTSCR2; nucleolar protein 53	-	Ribosome biogenesis	ko03009	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.