Gene detail

Detailed information of Csp0G457480 in Chrysogorgia sp. JL179-B06

Genomic Location: Contig00838:9828...21511
NR annotation: no NCBI-NR hit recorded
Species abbreviation CSP1 · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Csp0G457480

ATGGAGGACGAGTTGTTGAAAAGGTCGAAATACCCAGTGGTTTTTGTAAACCACCTTGATACCTACGTTGGAAAAAACATAAGCAAGGTTATTGCTAGCTCAGTTGTCGGTGCCAATGCAGATGTAGCTGATAATGAATCTCAAGCGAGTGGCCAGGACGGGCAAAGAAAGGAAAACTGTTATAGAGTTGTTGGTACTCTTCATGATCCAGTTAAAAATGAAAAGCCTCATTGGGTTGAGGAAGTATTTCGGTATTCAAAAAAGGAAGAGTTACTTAAACACATCCTTCAAAGTGACATTATTATGTATGATATAATCAGTCACCCAGATCAAGTGGATGAAGCAACATGGGTCATTTCAGCCCTTCATGCTGAGCTCGAGAACTTTATGTCACCAAAAACATTCATTTGTCTGTCATCAATAATGACCTGGGCCAGGACCAAACCACTTGATCCAGATGAACCAGATATCCCATTTACTGAAGATGATTACAGGAGACGTCGGGCACATCCTAATTTTAGACCCCATATTAGCACAGAGAAGCTGGTTATAAAACTGGGGAAAACAAACAAGAACAAACTTGCTACCTTTGTTGTTGCCAGTGGTCTTATGTATGGAGCTGGAGAGGAAATATTCCATTCTCTGTTTAAGACAGCATGGCATGGTCAACTACCTGCTCTACAGTGTTATGGCAATGGACAGAATATTGTACCAATGATACATATTATTGACTTATCTTATGTCCTTGTCAATATCTGTGATCGTCAACCAAAAGTACATTACCTGATTGCAAAAGATGATTCACAATCCCCCTTGGAAGAAATAGTTAAGGCTGTGAGTGGCAATCTTGGTAATGGCAAGATGCAACATGTTACCAAAGAAGAAGCATTGCTAATCAAGGACCTACAGCAAACAGACTTTGACATGCTGTTGGTGAACTTAAGAATGGATGCTGGGTATATTCGTGAAGGAATGAACATCTACTGGAAGGCTGAGACTGGTTTAATAGACAACATTGAAAACACCATTCAAGAATATAAGAAAACTAGAGGACTATTGCCATTCAGAGTCTGTGTATTGGGTGCACCGTCAACTGGTAAAACTTTGGTTGTTAAACAGCTTTGTAAGTTTTACAAGCTGCATCATATCAAGGTTCAGGATGTCATTGATGAAGCAGTCGAAAAACTGGAAAAAAGTGCAGCTCGTGCAGACACCGACGGAGATGACGAAGATGATGTAAAAGCTGAAGAAGATCGTGAATTATTGGATTCTTTAGTTGAAAACAAGGAACAGAATAATGGTCGTTATGATGATAACTTTGTAATAAGATTTTATAAGAATAAACTGCTTTCAATGCCTTGTCAAAACCAGGGATTTATTCTCGATGGTTTCCCAAAAACATACGAAGTGGCACGTGAACTTTTTGCTGCCGAAGATATTGATGATGAAGAGGAAGGAAGCACTTTATTCAAATATAACAAGTTAATTATGCCAGAAATAGTCTTGTCTCTTAACGCTACTGATGATTTCCTTAAAACAAGGGTAATGAATTTACCAGAGAGTGTTGTTGCAGGGTCACATAACACTGAAGAAGGTTTTCTTCGCCGCTTAGCTGAATTCCGAGCCGTAAATACGGAAGATGAAACGGTTCTCAACTACTTCGACGAACTTGAGATCCACCCAGATTATATTGACATATCTCAAGATACATGTCCAAAAATGTCCAATACTGTCGATGAAATAAAGAAGTTAATTGGAGAACCAAGAAACTACGGACCTACTCCAGAAGAACTGATCGAGATCCAACGCGTTGAAGCAGAGAAACAGCTGGAGCGAGAACGAAGAGAAAAAGAAGACAGAATTCGCAAAGAAGCAGAAGAAGCCACAGAAAGAGTAAGAAAAGAAGACGAATGGAAAATTCGTCATAACGAAGTAAAGAAAGAAGAACAAGAAGTACTTGATACTCAATCTATACCATTAAGGAACTATCTTATGAAACATGTCATGCCTACTTTATCTCAGGGCCTTGTGGAATGTACAAAAATACGGCCGGACGACCCTATTGATTTTCTGGCTGAATATCTCTTCAAAAACAATCCGCAAATTGATTGA

Transcript

Csp0G457480

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF05186 all species →	Dpy-30	Dpy-30 motif	Motif	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR027417 all species →	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR036291 all species →	Homologous_superfamily	NAD(P)-binding domain superfamily	Interproscan
IPR047499 all species →	Domain	Adenylate kinase 7, dimerization/docking domain	Interproscan
IPR000850 all species →	Family	Adenylate kinase/UMP-CMP kinase	Interproscan
IPR007858 all species →	Conserved_site	Dpy-30 motif	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR23359 all species →	NUCLEOTIDE KINASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0004017 all species →	Molecular Function	adenylate kinase activity	Interproscan
GO:0004127 all species →	Molecular Function	(d)CMP kinase activity	Interproscan
GO:0004550 all species →	Molecular Function	nucleoside diphosphate kinase activity	Interproscan
GO:0005524 all species →	Molecular Function	ATP binding	Interproscan
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan
GO:0006139 all species →	Biological Process	nucleobase-containing compound metabolic process	Interproscan
GO:0006165 all species →	Biological Process	obsolete nucleoside diphosphate phosphorylation	Interproscan
GO:0019205 all species →	Molecular Function	nucleobase-containing compound kinase activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K00939	adk, AK; adenylate kinase	EC:2.7.4.3	Exosome	ko04147	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.