Gene detail

Detailed information of Csp0G458380 in Chrysogorgia sp. JL179-B06

Genomic Location: Contig00838:799072...810678
NR annotation: no NCBI-NR hit recorded
Species Chrysogorgia sp. JL179-B06 · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF02475 all species →	Met_10	Met-10+ like-protein	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR025792 all species →	Family	tRNA (guanine(37)-N(1))-methyltransferase, eukaryotic	Interproscan
IPR029063 all species →	Homologous_superfamily	S-adenosyl-L-methionine-dependent methyltransferase superfamily	Interproscan
IPR030382 all species →	Domain	SAM-dependent methyltransferase TRM5/TYW2-type	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR23245 all species →	TRNA METHYLTRANSFERASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0030488 all species →	Biological Process	tRNA methylation	Interproscan
GO:0052906 all species →	Molecular Function	tRNA (guanine(37)-N1)-methyltransferase activity	Interproscan
GO:0002939 all species →	Biological Process	tRNA N1-guanine methylation	Interproscan
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan
GO:0005759 all species →	Cellular Component	mitochondrial matrix	Interproscan
GO:0008175 all species →	Molecular Function	tRNA methyltransferase activity	Interproscan
GO:0009019 all species →	Molecular Function	obsolete tRNA (guanine-N1-)-methyltransferase activity	Interproscan
GO:0070901 all species →	Biological Process	mitochondrial tRNA methylation	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K15429	TRM5, TRMT5; tRNA (guanine37-N1)-methyltransferase	EC:2.1.1.228	Transfer RNA biogenesis	ko03016	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.