Genomic Location: Contig00857:4010631...4016269
NR annotation: no NCBI-NR hit recorded
Species abbreviation CSP1 · all data for this species · gene families
| CDS |
| Csp0G486980 |
| Transcript |
| Csp0G486980 |
| Protein |
| Csp0G486980 |
| Family type | Membership / link |
|---|---|
| Ubiquitin family | UBD|Other|Beta-prp · all ubiquitin genes in this species |
| Ubiquitin family | E3|E3 adaptor Cullin RING|DWD · all ubiquitin genes in this species |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00400 all species → | WD40 | WD domain, G-beta repeat | Repeat | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR001680 all species → | Repeat | WD40 repeat | Interproscan |
| IPR028884 all species → | Family | tRNA (guanine-N(7)-)-methyltransferase non-catalytic subunit | Interproscan |
| IPR015943 all species → | Homologous_superfamily | WD40/YVTN repeat-like-containing domain superfamily | Interproscan |
| IPR019775 all species → | Conserved_site | WD40 repeat, conserved site | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR16288 all species → | WD40 REPEAT PROTEIN 4 | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0005515 all species → | Molecular Function | protein binding | Interproscan |
| GO:0005634 all species → | Cellular Component | nucleus | Interproscan |
| GO:0005829 all species → | Cellular Component | cytosol | Interproscan |
| GO:0006400 all species → | Biological Process | tRNA modification | Interproscan |
| GO:0036265 all species → | Biological Process | RNA (guanine-N7)-methylation | Interproscan |
| GO:0043527 all species → | Cellular Component | tRNA methyltransferase complex | Interproscan |
| KO | Enzyme | Enzyme ID | Pathway | Map ID | Source |
|---|---|---|---|---|---|
| K15443 | TRM82, WDR4; tRNA (guanine-N(7)-)-methyltransferase subunit TRM82 | - | Transfer RNA biogenesis | ko03016 | deepkoala |
