Detailed information of Csp0G500150 in Chrysogorgia sp. JL179-B06

Genomic Location: Contig00889:322006...327604
NR annotation: no NCBI-NR hit recorded
Species abbreviation CSP1 · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 Gene family
Family typeMembership / link
Transcription factor familyHomeobox · all TF in this species

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00412
all species →
LIMLIM domainDomainInterproscan
PF00046
all species →
HomeodomainHomeodomainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR050453
all species →
FamilyLIM/homeobox transcription factorsInterproscan
IPR001356
all species →
DomainHomeobox domainInterproscan
IPR001781
all species →
DomainZinc finger, LIM-typeInterproscan
IPR009057
all species →
Homologous_superfamilyHomeobox-like domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24208
all species →
LIM/HOMEOBOX PROTEIN LHXInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0000977
all species →
Molecular FunctionRNA polymerase II transcription regulatory region sequence-specific DNA bindingInterproscan
GO:0000981
all species →
Molecular FunctionDNA-binding transcription factor activity, RNA polymerase II-specificInterproscan
GO:0005634
all species →
Cellular ComponentnucleusInterproscan
GO:0006357
all species →
Biological Processregulation of transcription by RNA polymerase IIInterproscan
GO:0030182
all species →
Biological Processneuron differentiationInterproscan
GO:0003677
all species →
Molecular FunctionDNA bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for Csp0G500150.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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