Detailed information of Csp0G520260 in Chrysogorgia sp. JL179-B06

Genomic Location: Contig00930:454606...457458
NR annotation: no NCBI-NR hit recorded
Species Chrysogorgia sp. JL179-B06 · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0017783 (this species only) · gene tree & orthology

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01391
all species →
CollagenCollagen triple helix repeat (20 copies)RepeatInterproscan
PF06954
all species →
ResistinResistinFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036262
all species →
Homologous_superfamilyResistin-like superfamilyInterproscan
IPR008160
all species →
RepeatCollagen triple helix repeatInterproscan
IPR050149
all species →
FamilyCollagen superfamilyInterproscan
IPR009714
all species →
FamilyResistin-like molecule hormone familyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24023
all species →
COLLAGEN ALPHAInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005179
all species →
Molecular Functionhormone activityInterproscan
GO:0005576
all species →
Cellular Componentextracellular regionInterproscan
GO:0005615
all species →
Cellular Componentextracellular spaceInterproscan
GO:0030020
all species →
Molecular Functionextracellular matrix structural constituent conferring tensile strengthInterproscan
GO:0030198
all species →
Biological Processextracellular matrix organizationInterproscan
GO:0031012
all species →
Cellular Componentextracellular matrixInterproscan
GO:0062023
all species →
Cellular Componentcollagen-containing extracellular matrixInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for Csp0G520260.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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