Gene detail

Detailed information of Cxam_g10219.t1 in Cassiopea xamachana

Genomic Location: :...
NR annotation: XP_012559877.1, non-POU domain-containing octamer-binding protein isoform X2 [Hydra vulgaris]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
Q5ZK88	Paraspeckle component 1 OS=Gallus gallus OX=9031 GN=PSPC1 PE=2 SV=1
Q1LZD9	Paraspeckle component 1 OS=Bos taurus OX=9913 GN=PSPC1 PE=2 SV=1
Q4KLH4	Paraspeckle component 1 OS=Rattus norvegicus OX=10116 GN=Pspc1 PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13733	Glyco_transf_7N	N-terminal region of glycosyl transferase group 7	Domain	Interproscan
PF00076	RRM_1	RNA recognition motif	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR035979	Homologous_superfamily	RNA-binding domain superfamily	Interproscan
IPR012677	Homologous_superfamily	Nucleotide-binding alpha-beta plait domain superfamily	Interproscan
IPR000504	Domain	RNA recognition motif domain	Interproscan
IPR027995	Domain	Galactosyltransferase, N-terminal	Interproscan
IPR029044	Homologous_superfamily	Nucleotide-diphospho-sugar transferases	Interproscan
IPR003859	Family	Beta-1,4-galactosyltransferase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR23189	RNA RECOGNITION MOTIF-CONTAINING	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003676	Molecular Function	nucleic acid binding	Interproscan
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0003723	Molecular Function	RNA binding	Interproscan
GO:0005975	Biological Process	carbohydrate metabolic process	Interproscan
GO:0016757	Molecular Function	glycosyltransferase activity	Interproscan