Gene detail

Detailed information of Cxam_g10610.t1 in Cassiopea xamachana

Genomic Location: :...
NR annotation: WP_282159336.1, DeoR/GlpR family DNA-binding transcription regulator [Shimia thalassica]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
Q51391	Glycerol-3-phosphate regulon repressor OS=Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1) OX=208964 GN=glpR PE=3 SV=2
P0ACL0	Glycerol-3-phosphate regulon repressor OS=Escherichia coli (strain K12) OX=83333 GN=glpR PE=1 SV=1
P0ACL1	Glycerol-3-phosphate regulon repressor OS=Shigella flexneri OX=623 GN=glpR PE=4 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00455	DeoRC	DeoR C terminal sensor domain	Domain	Interproscan
PF08220	HTH_DeoR	DeoR-like helix-turn-helix domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036390	Homologous_superfamily	Winged helix DNA-binding domain superfamily	Interproscan
IPR014036	Domain	DeoR-like transcriptional repressor, C-terminal sensor domain	Interproscan
IPR037171	Homologous_superfamily	NagB/RpiA transferase-like	Interproscan
IPR001034	Domain	DeoR-type HTH domain	Interproscan
IPR036388	Homologous_superfamily	Winged helix-like DNA-binding domain superfamily	Interproscan
IPR050313	Family	Carbohydrate Metabolism HTH-type Transcriptional Regulators	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR30363	HTH-TYPE TRANSCRIPTIONAL REGULATOR SRLR-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003700	Molecular Function	DNA-binding transcription factor activity	Interproscan
GO:0006355	Biological Process	regulation of DNA-templated transcription	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K02444	glpR; DeoR family transcriptional regulator, glycerol-3-phosphate regulon repressor	-	Transcription factors	ko03000	deepkoala