Gene detail

Detailed information of Cxam_g12015.t1 in Cassiopea xamachana

Genomic Location: :...
NR annotation: MBN2491154.1, 50S ribosomal protein L4 [Planctomycetota bacterium]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
Q0AUI1	Large ribosomal subunit protein uL4 OS=Syntrophomonas wolfei subsp. wolfei (strain DSM 2245B / Goettingen) OX=335541 GN=rplD PE=3 SV=1
B2A4E0	Large ribosomal subunit protein uL4 OS=Natranaerobius thermophilus (strain ATCC BAA-1301 / DSM 18059 / JW/NM-WN-LF) OX=457570 GN=rplD PE=3 SV=1
Q9Z9L3	Large ribosomal subunit protein uL4 OS=Halalkalibacterium halodurans (strain ATCC BAA-125 / DSM 18197 / FERM 7344 / JCM 9153 / C-125) OX=272558 GN=rplD PE=3 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00573	Ribosomal_L4	Ribosomal protein L4/L1 family	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR013005	Family	Large ribosomal subunit protein uL4-like	Interproscan
IPR002136	Family	Large ribosomal subunit protein uL4	Interproscan
IPR023574	Homologous_superfamily	Large ribosomal subunit protein uL4 domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10746	50S RIBOSOMAL PROTEIN L4	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003735	Molecular Function	structural constituent of ribosome	Interproscan
GO:0005840	Cellular Component	ribosome	Interproscan
GO:0006412	Biological Process	translation	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K02926	RP-L4, MRPL4, rplD; large subunit ribosomal protein L4	-	Ribosome	ko03011	deepkoala