Gene detail

Detailed information of Cxam_g1208.t1 in Cassiopea xamachana

Genomic Location: :...
NR annotation: WP_170398688.1, dimethylsulfoniopropionate demethylase [Ruegeria arenilitoris]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
Q5LS57	Dimethylsulfoniopropionate demethylase DmdA OS=Ruegeria pomeroyi (strain ATCC 700808 / DSM 15171 / DSS-3) OX=246200 GN=dmdA PE=1 SV=1
Q4FP21	Dimethylsulfoniopropionate demethylase DmdA OS=Pelagibacter ubique (strain HTCC1062) OX=335992 GN=dmdA PE=1 SV=1
Q8RCV9	Aminomethyltransferase OS=Caldanaerobacter subterraneus subsp. tengcongensis (strain DSM 15242 / JCM 11007 / NBRC 100824 / MB4) OX=273068 GN=gcvT PE=3 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF08669	GCV_T_C	Glycine cleavage T-protein C-terminal barrel domain	Domain	Interproscan
PF01571	GCV_T	Aminomethyltransferase folate-binding domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR013977	Domain	Glycine cleavage T-protein, C-terminal barrel domain	Interproscan
IPR029043	Homologous_superfamily	Glycine cleavage T-protein/YgfZ, C-terminal	Interproscan
IPR028896	Family	Aminomethyltransferase-like	Interproscan
IPR006222	Domain	Aminomethyltransferase, folate-binding domain	Interproscan
IPR027266	Homologous_superfamily	GTP-binding protein TrmE/Aminomethyltransferase GcvT, domain 1	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR43757	AMINOMETHYLTRANSFERASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K17486	dmdA; dimethylsulfoniopropionate demethylase	EC:2.1.1.269	Sulfur metabolism	ko00920	deepkoala