Gene detail

Detailed information of Cxam_g12180.t1 in Cassiopea xamachana

Genomic Location: :...
NR annotation: XP_002166018.3, trafficking protein particle complex subunit 13 [Hydra vulgaris]

Gene Structure

Sequence

Uniprot

Gene family

Uniprot term	Description
A5PLN9	Trafficking protein particle complex subunit 13 OS=Homo sapiens OX=9606 GN=TRAPPC13 PE=1 SV=2
Q3TIR1	Trafficking protein particle complex subunit 13 OS=Mus musculus OX=10090 GN=Trappc13 PE=2 SV=1
Q6GPR5	Trafficking protein particle complex subunit 13 OS=Xenopus laevis OX=8355 GN=trappc13 PE=2 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00240	ubiquitin	Ubiquitin family	Domain	Interproscan
PF00627	UBA	UBA/TS-N domain	Domain	Interproscan
PF09280	XPC-binding	XPC-binding domain	Domain	Interproscan
PF06159	DUF974	Protein of unknown function (DUF974)	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000626	Domain	Ubiquitin-like domain	Interproscan
IPR015940	Domain	Ubiquitin-associated domain	Interproscan
IPR041811	Domain	RAD23A/RAD23B, UBA1 domain	Interproscan
IPR004806	Family	UV excision repair protein Rad23	Interproscan
IPR036353	Homologous_superfamily	XPC-binding domain superfamily	Interproscan
IPR009060	Homologous_superfamily	UBA-like superfamily	Interproscan
IPR010378	Family	Trafficking protein particle complex subunit 13	Interproscan
IPR015360	Domain	XPC-binding domain	Interproscan
IPR029071	Homologous_superfamily	Ubiquitin-like domain superfamily	Interproscan
IPR006636	Domain	Heat shock chaperonin-binding	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR13134	UNCHARACTERIZED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0006289	Biological Process	nucleotide-excision repair	Interproscan
GO:0003684	Molecular Function	damaged DNA binding	Interproscan
GO:0043161	Biological Process	proteasome-mediated ubiquitin-dependent protein catabolic process	Interproscan
GO:1990072	Cellular Component	TRAPPIII protein complex	Interproscan