Detailed information of Cxam_g12295.t1 in Cassiopea xamachana

Genomic Location: :...
NR annotation: MBN2492223.1, response regulator [Planctomycetota bacterium]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
O69730Probable transcriptional regulatory protein TcrX OS=Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) OX=83332 GN=tcrX PE=1 SV=3
Q99U73Response regulator ArlR OS=Staphylococcus aureus (strain N315) OX=158879 GN=arlR PE=3 SV=2
A0A0H2ZN37Transcriptional regulatory protein WalR OS=Streptococcus pneumoniae serotype 2 (strain D39 / NCTC 7466) OX=373153 GN=walR PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00072Response_regResponse regulator receiver domainDomainInterproscan
PF00990GGDEFDiguanylate cyclase, GGDEF domainDomainInterproscan
PF18551TackOD1Thaumarchaeal output domain 1DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001789DomainSignal transduction response regulator, receiver domainInterproscan
IPR043128Homologous_superfamilyReverse transcriptase/Diguanylate cyclase domainInterproscan
IPR018247Binding_siteEF-Hand 1, calcium-binding siteInterproscan
IPR000160DomainGGDEF domainInterproscan
IPR029787Homologous_superfamilyNucleotide cyclaseInterproscan
IPR011006Homologous_superfamilyCheY-like superfamilyInterproscan
IPR039420FamilyTranscriptional regulatory protein WalR-likeInterproscan
IPR040572DomainThaumarchaeal output domain 1Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR48111REGULATOR OF RPOSInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0000160Biological Processphosphorelay signal transduction systemInterproscan
GO:0000156Molecular Functionphosphorelay response regulator activityInterproscan
GO:0000976Molecular Functiontranscription cis-regulatory region bindingInterproscan
GO:0005829Cellular ComponentcytosolInterproscan
GO:0006355Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0032993Cellular Componentprotein-DNA complexInterproscan

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