Gene detail

Detailed information of Cxam_g12757.t1 in Cassiopea xamachana

Genomic Location: :...
NR annotation: MBI4564523.1, coproporphyrinogen III oxidase family protein [Planctomycetota bacterium]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
P9WP72	Heme chaperone HemW OS=Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh) OX=83331 GN=hemW PE=3 SV=2
P9WP73	Heme chaperone HemW OS=Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) OX=83332 GN=hemW PE=1 SV=2
P57615	Heme chaperone HemW OS=Buchnera aphidicola subsp. Acyrthosiphon pisum (strain APS) OX=107806 GN=hemW PE=3 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF04055	Radical_SAM	Radical SAM superfamily	Domain	Interproscan
PF06969	HemN_C	HemN C-terminal domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR006638	Domain	Elp3/MiaA/NifB-like, radical SAM core domain	Interproscan
IPR007197	Domain	Radical SAM	Interproscan
IPR010723	Domain	HemN, C-terminal	Interproscan
IPR034505	Family	Anaerobic coproporphyrinogen-III oxidase	Interproscan
IPR013785	Homologous_superfamily	Aldolase-type TIM barrel	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR13932	COPROPORPHYRINIGEN III OXIDASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003824	Molecular Function	catalytic activity	Interproscan
GO:0051536	Molecular Function	iron-sulfur cluster binding	Interproscan
GO:0005737	Cellular Component	cytoplasm	Interproscan
GO:0006779	Biological Process	porphyrin-containing compound biosynthetic process	Interproscan
GO:0051539	Molecular Function	4 iron, 4 sulfur cluster binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K02495	hemN, hemZ; oxygen-independent coproporphyrinogen III oxidase	EC:1.3.98.3	Porphyrin metabolism	ko00860	deepkoala