Gene detail

Detailed information of Cxam_g12802.t1 in Cassiopea xamachana

Genomic Location: :...
NR annotation: EDO48710.1, predicted protein, partial [Nematostella vectensis]

Gene Structure

Sequence

Uniprot

Gene family

Uniprot term	Description
Q6GLB9	Homeobox protein EMX1 OS=Xenopus tropicalis OX=8364 GN=emx1 PE=2 SV=1
Q804S6	Homeobox protein EMX1 OS=Danio rerio OX=7955 GN=emx1 PE=2 SV=1
Q04742	Homeobox protein EMX1 OS=Mus musculus OX=10090 GN=Emx1 PE=1 SV=2

Gene family	Subfamily
Transcription Factors Family	Homeobox

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00046	Homeodomain	Homeodomain	Domain	Interproscan
PF00025	Arf	ADP-ribosylation factor family	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001356	Domain	Homeobox domain	Interproscan
IPR050877	Family	EMX/VAX/Noto Homeobox Transcription Factors	Interproscan
IPR009057	Homologous_superfamily	Homeobox-like domain superfamily	Interproscan
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR006689	Family	Small GTPase superfamily, ARF/SAR type	Interproscan
IPR000047	Conserved_site	Helix-turn-helix motif	Interproscan
IPR017970	Conserved_site	Homeobox, conserved site	Interproscan
IPR020479	Domain	Homeobox domain, metazoa	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24339	HOMEOBOX PROTEIN EMX-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003677	Molecular Function	DNA binding	Interproscan
GO:0000978	Molecular Function	RNA polymerase II cis-regulatory region sequence-specific DNA binding	Interproscan
GO:0000981	Molecular Function	DNA-binding transcription factor activity, RNA polymerase II-specific	Interproscan
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0006357	Biological Process	regulation of transcription by RNA polymerase II	Interproscan
GO:0007417	Biological Process	central nervous system development	Interproscan
GO:0030182	Biological Process	neuron differentiation	Interproscan
GO:0003924	Molecular Function	GTPase activity	Interproscan
GO:0005525	Molecular Function	GTP binding	Interproscan
GO:0006355	Biological Process	regulation of DNA-templated transcription	Interproscan