Detailed information of Cxam_g13599.t1 in Cassiopea xamachana

Genomic Location: :...
NR annotation: WP_170335276.1, HAMP domain-containing sensor histidine kinase [Ruegeria arenilitoris]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q50136Transcriptional regulatory protein PrrA OS=Mycobacterium leprae (strain TN) OX=272631 GN=prrA PE=3 SV=2
P0A5Z7Transcriptional regulatory protein PrrA OS=Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97) OX=233413 GN=prrA PE=3 SV=1
P9WGM0Transcriptional regulatory protein PrrA OS=Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh) OX=83331 GN=prrA PE=3 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00486Trans_reg_CTranscriptional regulatory protein, C terminalDomainInterproscan
PF02518HATPase_cHistidine kinase-, DNA gyrase B-, and HSP90-like ATPaseDomainInterproscan
PF00672HAMPHAMP domainDomainInterproscan
PF00072Response_regResponse regulator receiver domainDomainInterproscan
PF00512HisKAHis Kinase A (phospho-acceptor) domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001867DomainOmpR/PhoB-type DNA-binding domainInterproscan
IPR001789DomainSignal transduction response regulator, receiver domainInterproscan
IPR016032Homologous_superfamilySignal transduction response regulator, C-terminal effectorInterproscan
IPR036890Homologous_superfamilyHistidine kinase/HSP90-like ATPase superfamilyInterproscan
IPR036097Homologous_superfamilySignal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamilyInterproscan
IPR003661DomainSignal transduction histidine kinase, dimerisation/phosphoacceptor domainInterproscan
IPR003594DomainHistidine kinase/HSP90-like ATPaseInterproscan
IPR011006Homologous_superfamilyCheY-like superfamilyInterproscan
IPR005467DomainHistidine kinase domainInterproscan
IPR004358DomainSignal transduction histidine kinase-related protein, C-terminalInterproscan
IPR003660DomainHAMP domainInterproscan
IPR036388Homologous_superfamilyWinged helix-like DNA-binding domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR43547TWO-COMPONENT HISTIDINE KINASEInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0000160Biological Processphosphorelay signal transduction systemInterproscan
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0006355Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0000155Molecular Functionphosphorelay sensor kinase activityInterproscan
GO:0007165Biological Processsignal transductionInterproscan
GO:0016310Biological ProcessphosphorylationInterproscan
GO:0016772Molecular Functiontransferase activity, transferring phosphorus-containing groupsInterproscan
GO:0016020Cellular ComponentmembraneInterproscan

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