Detailed information of Cxam_g1408.t1 in Cassiopea xamachana

Genomic Location: :...
NR annotation: WP_170335760.1, ribonuclease D [Ruegeria arenilitoris]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q28RA7Ribonuclease D OS=Jannaschia sp. (strain CCS1) OX=290400 GN=rnd PE=3 SV=1
A7HYE5Ribonuclease D OS=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) OX=402881 GN=rnd PE=3 SV=2
Q1QLI8Ribonuclease D OS=Nitrobacter hamburgensis (strain DSM 10229 / NCIMB 13809 / X14) OX=323097 GN=rnd PE=3 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01612DNA_pol_A_exo13'-5' exonucleaseDomainInterproscan
PF00570HRDCHRDC domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR051086FamilyRibonuclease D-likeInterproscan
IPR010997Homologous_superfamilyHRDC-like superfamilyInterproscan
IPR006292FamilyRibonuclease DInterproscan
IPR002121DomainHRDC domainInterproscan
IPR002562Domain3'-5' exonuclease domainInterproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR044876Homologous_superfamilyHRDC domain superfamilyInterproscan
IPR036397Homologous_superfamilyRibonuclease H superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR47649RIBONUCLEASE DInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0000166Molecular Functionnucleotide bindingInterproscan
GO:0044237Biological Processobsolete cellular metabolic processInterproscan
GO:0008033Biological ProcesstRNA processingInterproscan
GO:0008408Molecular Function3'-5' exonuclease activityInterproscan
GO:0033890Molecular Functionribonuclease D activityInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0006139Biological Processnucleobase-containing compound metabolic processInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K03684rnd; ribonuclease DEC:3.1.13.5
Transfer RNA biogenesisko03016deepkoala

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