Gene detail

Detailed information of Cxam_g1449.t1 in Cassiopea xamachana

Genomic Location: :...
NR annotation: WP_254436159.1, tRNA dihydrouridine synthase DusB [Ruegeria arenilitoris]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
Q08111	Probable tRNA-dihydrouridine synthase OS=Rhodobacter capsulatus (strain ATCC BAA-309 / NBRC 16581 / SB1003) OX=272942 GN=dus PE=3 SV=1
P41504	Probable tRNA-dihydrouridine synthase OS=Rhizobium leguminosarum bv. phaseoli OX=385 GN=dus PE=3 SV=1
Q4UNJ4	Probable tRNA-dihydrouridine synthase OS=Rickettsia felis (strain ATCC VR-1525 / URRWXCal2) OX=315456 GN=dus PE=3 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01207	Dus	Dihydrouridine synthase (Dus)	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR013785	Homologous_superfamily	Aldolase-type TIM barrel	Interproscan
IPR035587	Domain	DUS-like, FMN-binding domain	Interproscan
IPR018517	Conserved_site	tRNA-dihydrouridine synthase, conserved site	Interproscan
IPR024036	Homologous_superfamily	tRNA-dihydrouridine synthase, putative, C-terminal	Interproscan
IPR004652	Family	tRNA-dihydrouridine synthase DusB-like	Interproscan
IPR001269	Family	tRNA-dihydrouridine synthase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR45846	TRNA-DIHYDROURIDINE(47) SYNTHASE [NAD(P)(+)]-LIKE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0008033	Biological Process	tRNA processing	Interproscan
GO:0017150	Molecular Function	tRNA dihydrouridine synthase activity	Interproscan
GO:0050660	Molecular Function	flavin adenine dinucleotide binding	Interproscan
GO:0016491	Molecular Function	oxidoreductase activity	Interproscan
GO:0003723	Molecular Function	RNA binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K05540	dusB; tRNA-dihydrouridine synthase B	EC:1.-.-.-	Transfer RNA biogenesis	ko03016	deepkoala