Detailed information of Cxam_g1495.t1 in Cassiopea xamachana

Genomic Location: :...
NR annotation: WP_170325182.1, 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA [Ruegeria arenilitoris]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q1GI39Ribosomal RNA small subunit methyltransferase A OS=Ruegeria sp. (strain TM1040) OX=292414 GN=rsmA PE=3 SV=1
Q5LQN0Ribosomal RNA small subunit methyltransferase A OS=Ruegeria pomeroyi (strain ATCC 700808 / DSM 15171 / DSS-3) OX=246200 GN=rsmA PE=3 SV=1
Q164G1Ribosomal RNA small subunit methyltransferase A OS=Roseobacter denitrificans (strain ATCC 33942 / OCh 114) OX=375451 GN=rsmA PE=3 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00398RrnaADRibosomal RNA adenine dimethylaseDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR023165Homologous_superfamilyrRNA adenine dimethylase-like, C-terminalInterproscan
IPR020598DomainRibosomal RNA adenine methylase transferase, N-terminalInterproscan
IPR001737FamilyRibosomal RNA adenine methyltransferase KsgA/ErmInterproscan
IPR011530FamilyRibosomal RNA adenine dimethylaseInterproscan
IPR029063Homologous_superfamilyS-adenosyl-L-methionine-dependent methyltransferase superfamilyInterproscan
IPR020596Conserved_siteRibosomal RNA adenine methylase transferase, conserved siteInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11727DIMETHYLADENOSINE TRANSFERASEInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0000154Biological ProcessrRNA modificationInterproscan
GO:0000179Molecular FunctionrRNA (adenine-N6,N6-)-dimethyltransferase activityInterproscan
GO:0006364Biological ProcessrRNA processingInterproscan
GO:0005829Cellular ComponentcytosolInterproscan
GO:0031167Biological ProcessrRNA methylationInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K02528ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferaseEC:2.1.1.182
Ribosome biogenesisko03009deepkoala

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