Gene detail

Detailed information of Cxam_g15390.t1 in Cassiopea xamachana

Genomic Location: :...
NR annotation: OFV93957.1, asparagine--tRNA ligase [Acidobacteria bacterium RIFCSPLOWO2_02_FULL_64_15]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
A4J412	Asparagine--tRNA ligase OS=Desulforamulus reducens (strain ATCC BAA-1160 / DSM 100696 / MI-1) OX=349161 GN=asnS PE=3 SV=1
A9GBR2	Asparagine--tRNA ligase OS=Sorangium cellulosum (strain So ce56) OX=448385 GN=asnS PE=3 SV=1
Q1IHQ3	Asparagine--tRNA ligase OS=Koribacter versatilis (strain Ellin345) OX=204669 GN=asnS PE=3 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00152	tRNA-synt_2	tRNA synthetases class II (D, K and N)	Domain	Interproscan
PF01336	tRNA_anti-codon	OB-fold nucleic acid binding domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR006195	Domain	Aminoacyl-tRNA synthetase, class II	Interproscan
IPR012340	Homologous_superfamily	Nucleic acid-binding, OB-fold	Interproscan
IPR045864	Homologous_superfamily	Class II Aminoacyl-tRNA synthetase/Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL)	Interproscan
IPR004364	Domain	Aminoacyl-tRNA synthetase, class II (D/K/N)	Interproscan
IPR004522	Family	Asparagine-tRNA ligase	Interproscan
IPR004365	Domain	OB-fold nucleic acid binding domain, AA-tRNA synthetase-type	Interproscan
IPR002312	Family	Aspartyl/Asparaginyl-tRNA synthetase, class IIb	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR22594	ASPARTYL/LYSYL-TRNA SYNTHETASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0000166	Molecular Function	nucleotide binding	Interproscan
GO:0004812	Molecular Function	aminoacyl-tRNA ligase activity	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0006418	Biological Process	tRNA aminoacylation for protein translation	Interproscan
GO:0004816	Molecular Function	asparagine-tRNA ligase activity	Interproscan
GO:0006421	Biological Process	asparaginyl-tRNA aminoacylation	Interproscan
GO:0003676	Molecular Function	nucleic acid binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K01893	NARS, asnS; asparaginyl-tRNA synthetase	EC:6.1.1.22	Transfer RNA biogenesis	ko03016	deepkoala