Gene detail

Detailed information of Cxam_g15896.t1 in Cassiopea xamachana

Genomic Location: :...
NR annotation: MCL6545257.1, beta-ketoacyl-[acyl-carrier-protein] synthase family protein [Bryobacteraceae bacterium]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
P72331	Nodulation protein E OS=Rhizobium sp. (strain N33) OX=103798 GN=nodE PE=3 SV=1
P06230	Nodulation protein E OS=Rhizobium meliloti (strain 1021) OX=266834 GN=nodE PE=3 SV=1
P04683	Nodulation protein E OS=Rhizobium leguminosarum bv. viciae OX=387 GN=nodE PE=3 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13561	adh_short_C2	Enoyl-(Acyl carrier protein) reductase	Domain	Interproscan
PF00109	ketoacyl-synt	Beta-ketoacyl synthase, N-terminal domain	Domain	Interproscan
PF02801	Ketoacyl-synt_C	Beta-ketoacyl synthase, C-terminal domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR016039	Homologous_superfamily	Thiolase-like	Interproscan
IPR020841	Domain	Polyketide synthase, beta-ketoacyl synthase domain	Interproscan
IPR018201	Active_site	Beta-ketoacyl synthase, active site	Interproscan
IPR036291	Homologous_superfamily	NAD(P)-binding domain superfamily	Interproscan
IPR014030	Domain	Beta-ketoacyl synthase, N-terminal	Interproscan
IPR014031	Domain	Beta-ketoacyl synthase, C-terminal	Interproscan
IPR002347	Family	Short-chain dehydrogenase/reductase SDR	Interproscan
IPR000794	Family	Beta-ketoacyl synthase	Interproscan
IPR003560	Family	2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11712	POLYKETIDE SYNTHASE-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0016746	Molecular Function	acyltransferase activity	Interproscan
GO:0004315	Molecular Function	3-oxoacyl-[acyl-carrier-protein] synthase activity	Interproscan
GO:0006633	Biological Process	fatty acid biosynthetic process	Interproscan
GO:0005829	Cellular Component	cytosol	Interproscan
GO:0008667	Molecular Function	2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase activity	Interproscan
GO:0019290	Biological Process	siderophore biosynthetic process	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K09458	fabF, OXSM, CEM1; 3-oxoacyl-[acyl-carrier-protein] synthase II	EC:2.3.1.179	Lipid biosynthesis proteins	ko01004	deepkoala