Detailed information of Cxam_g16037.t1 in Cassiopea xamachana

Genomic Location: :...
NR annotation: XP_047144204.1, DNA ligase 1 isoform X3 [Hydra vulgaris]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P51892DNA ligase 1 OS=Xenopus laevis OX=8355 GN=lig1 PE=2 SV=1
Q9W1H4DNA ligase 1 OS=Drosophila melanogaster OX=7227 GN=DNAlig1 PE=1 SV=2
Q42572DNA ligase 1 OS=Arabidopsis thaliana OX=3702 GN=LIG1 PE=2 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF04679DNA_ligase_A_CATP dependent DNA ligase C terminal region FamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR012309DomainDNA ligase, ATP-dependent, C-terminalInterproscan
IPR012340Homologous_superfamilyNucleic acid-binding, OB-foldInterproscan
IPR050191FamilyATP-dependent DNA ligaseInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR45674DNA LIGASE 1/3 FAMILY MEMBERInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003910Molecular FunctionDNA ligase (ATP) activityInterproscan
GO:0006281Biological ProcessDNA repairInterproscan
GO:0006310Biological ProcessDNA recombinationInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0005739Cellular ComponentmitochondrionInterproscan
GO:0006266Biological ProcessDNA ligationInterproscan
GO:0006273Biological Processlagging strand elongationInterproscan
GO:1903461Biological ProcessOkazaki fragment processing involved in mitotic DNA replicationInterproscan

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