Detailed information of Cxam_g16594.t1 in Cassiopea xamachana

Genomic Location: :...
NR annotation: MCI0683808.1, ATP-dependent helicase HrpB [Gemmataceae bacterium]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P37024ATP-dependent RNA helicase HrpB OS=Escherichia coli (strain K12) OX=83333 GN=hrpB PE=1 SV=3
P43329ATP-dependent RNA helicase HrpA OS=Escherichia coli (strain K12) OX=83333 GN=hrpA PE=1 SV=3
P45018ATP-dependent RNA helicase HrpA homolog OS=Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) OX=71421 GN=hrpA PE=3 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF08482HrpB_CATP-dependent helicase C-terminalFamilyInterproscan
PF13692Glyco_trans_1_4Glycosyl transferases group 1DomainInterproscan
PF00271Helicase_CHelicase conserved C-terminal domainDomainInterproscan
PF13439Glyco_transf_4Glycosyltransferase Family 4DomainInterproscan
PF21010HA2_CHelicase associated domain (HA2), ratchet-likeDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR007502DomainHelicase-associated domainInterproscan
IPR013689DomainATP-dependent RNA helicase HrpB, C-terminalInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR001650DomainHelicase, C-terminal domain-likeInterproscan
IPR010225FamilyATP-dependent helicase HrpBInterproscan
IPR028098DomainGlycosyltransferase subfamily 4-like, N-terminal domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR43519ATP-DEPENDENT RNA HELICASE HRPBInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0004386Molecular Functionhelicase activityInterproscan

TOP