Detailed information of Cxam_g16620.t1 in Cassiopea xamachana

Genomic Location: :...
NR annotation: XP_047136671.1, collagen alpha-1(II) chain [Hydra vulgaris]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
A2AX52Collagen alpha-4(VI) chain OS=Mus musculus OX=10090 GN=Col6a4 PE=1 SV=2
Q9QYE7Integrin alpha-D OS=Rattus norvegicus OX=10116 GN=Itgad PE=2 SV=1
Q28295von Willebrand factor OS=Canis lupus familiaris OX=9615 GN=VWF PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00092VWAvon Willebrand factor type A domainDomainInterproscan
PF01391CollagenCollagen triple helix repeat (20 copies)RepeatInterproscan
PF00095WAPWAP-type (Whey Acidic Protein) 'four-disulfide core'DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR002035Domainvon Willebrand factor, type AInterproscan
IPR050525FamilyExtracellular Matrix Assembly and OrganizationInterproscan
IPR036645Homologous_superfamilyElafin-like superfamilyInterproscan
IPR008197DomainWAP-type 'four-disulfide core' domainInterproscan
IPR008160RepeatCollagen triple helix repeatInterproscan
IPR036465Homologous_superfamilyvon Willebrand factor A-like domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24020COLLAGEN ALPHAInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005576Cellular Componentextracellular regionInterproscan
GO:0030414Molecular Functionpeptidase inhibitor activityInterproscan

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