Gene detail

Detailed information of Cxam_g18811.t1 in Cassiopea xamachana

Genomic Location: :...
NR annotation: MBN2491165.1, 50S ribosomal protein L11 [Planctomycetota bacterium]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
B0TC43	Large ribosomal subunit protein uL11 OS=Heliobacterium modesticaldum (strain ATCC 51547 / Ice1) OX=498761 GN=rplK PE=3 SV=1
Q3A9Q2	Large ribosomal subunit protein uL11 OS=Carboxydothermus hydrogenoformans (strain ATCC BAA-161 / DSM 6008 / Z-2901) OX=246194 GN=rplK PE=3 SV=1
P29395	Large ribosomal subunit protein uL11 OS=Thermotoga maritima (strain ATCC 43589 / DSM 3109 / JCM 10099 / NBRC 100826 / MSB8) OX=243274 GN=rplK PE=1 SV=3

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF03946	Ribosomal_L11_N	Ribosomal protein L11, N-terminal domain	Domain	Interproscan
PF00298	Ribosomal_L11	Ribosomal protein L11, RNA binding domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036769	Homologous_superfamily	Large ribosomal subunit protein uL11, C-terminal domain superfamily	Interproscan
IPR036796	Homologous_superfamily	Large ribosomal subunit protein uL11, N-terminal domain superfamily	Interproscan
IPR020784	Domain	Large ribosomal subunit protein uL11, N-terminal	Interproscan
IPR000911	Family	Ribosomal protein uL11	Interproscan
IPR006519	Family	Large ribosomal subunit protein uL11, bacterial-type	Interproscan
IPR020783	Domain	Large ribosomal subunit protein uL11, C-terminal	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11661	60S RIBOSOMAL PROTEIN L12	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003735	Molecular Function	structural constituent of ribosome	Interproscan
GO:0005840	Cellular Component	ribosome	Interproscan
GO:0006412	Biological Process	translation	Interproscan
GO:0015934	Cellular Component	large ribosomal subunit	Interproscan
GO:0070180	Molecular Function	large ribosomal subunit rRNA binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K02867	RP-L11, MRPL11, rplK; large subunit ribosomal protein L11	-	Ribosome	ko03011	deepkoala