Gene detail

Detailed information of Cxam_g1998.t1 in Cassiopea xamachana

Genomic Location: :...
NR annotation: XP_020632351.1, ATP-binding cassette sub-family B member 8, mitochondrial-like [Orbicella faveolata]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
B2GUP8	Mitochondrial potassium channel ATP-binding subunit OS=Xenopus tropicalis OX=8364 GN=abcb8 PE=2 SV=1
Q56A55	Mitochondrial potassium channel ATP-binding subunit OS=Danio rerio OX=7955 GN=abcb8 PE=2 SV=2
Q9CXJ4	Mitochondrial potassium channel ATP-binding subunit OS=Mus musculus OX=10090 GN=Abcb8 PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF06071	YchF-GTPase_C	Protein of unknown function (DUF933)	Domain	Interproscan
PF01926	MMR_HSR1	50S ribosome-binding GTPase	Family	Interproscan
PF01759	NTR	UNC-6/NTR/C345C module	Domain	Interproscan
PF00005	ABC_tran	ABC transporter	Domain	Interproscan
PF01392	Fz	Fz domain	Domain	Interproscan
PF00664	ABC_membrane	ABC transporter transmembrane region	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR012675	Homologous_superfamily	Beta-grasp domain superfamily	Interproscan
IPR006073	Domain	GTP binding domain	Interproscan
IPR013029	Domain	YchF, C-terminal domain	Interproscan
IPR008993	Homologous_superfamily	Tissue inhibitor of metalloproteinases-like, OB-fold	Interproscan
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR036640	Homologous_superfamily	ABC transporter type 1, transmembrane domain superfamily	Interproscan
IPR004095	Domain	TGS	Interproscan
IPR004396	Family	Ribosome-binding ATPase YchF/Obg-like ATPase 1	Interproscan
IPR011527	Domain	ABC transporter type 1, transmembrane domain	Interproscan
IPR018933	Domain	Netrin module, non-TIMP type	Interproscan
IPR003593	Domain	AAA+ ATPase domain	Interproscan
IPR023192	Homologous_superfamily	TGS-like domain superfamily	Interproscan
IPR003439	Domain	ABC transporter-like, ATP-binding domain	Interproscan
IPR020067	Domain	Frizzled domain	Interproscan
IPR031167	Domain	OBG-type guanine nucleotide-binding (G) domain	Interproscan
IPR036790	Homologous_superfamily	Frizzled cysteine-rich domain superfamily	Interproscan
IPR001134	Domain	Netrin domain	Interproscan
IPR017871	Conserved_site	ABC transporter-like, conserved site	Interproscan
IPR012676	Homologous_superfamily	TGS-like	Interproscan
IPR041706	Domain	YchF, N-terminal	Interproscan
IPR039421	Family	Type 1 protein exporter	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24221	ATP-BINDING CASSETTE SUB-FAMILY B	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005525	Molecular Function	GTP binding	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0016020	Cellular Component	membrane	Interproscan
GO:0016887	Molecular Function	ATP hydrolysis activity	Interproscan
GO:0055085	Biological Process	transmembrane transport	Interproscan
GO:0140359	Molecular Function	ABC-type transporter activity	Interproscan
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0016021	Cellular Component	membrane	Interproscan
GO:0042626	Molecular Function	ATPase-coupled transmembrane transporter activity	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K05658	ABCB1, CD243; ATP-binding cassette, subfamily B (MDR/TAP), member 1	EC:7.6.2.2	CD molecules	ko04090	deepkoala