Detailed information of Cxam_g20767.t1 in Cassiopea xamachana

Genomic Location: :...
NR annotation: QNN25181.1, alanine--tRNA ligase [Planctomycetales bacterium ZRK34]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P36428Alanine--tRNA ligase OS=Arabidopsis thaliana OX=3702 GN=ALATS PE=1 SV=3
B2FL33Alanine--tRNA ligase OS=Stenotrophomonas maltophilia (strain K279a) OX=522373 GN=alaS PE=3 SV=1
Q1I6Z8Alanine--tRNA ligase OS=Pseudomonas entomophila (strain L48) OX=384676 GN=alaS PE=3 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF02272DHHA1DHHA1 domainFamilyInterproscan
PF07973tRNA_SADThreonyl and Alanyl tRNA synthetase second additional domainDomainInterproscan
PF01411tRNA-synt_2ctRNA synthetases class II (A)FamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR012947DomainThreonyl/alanyl tRNA synthetase, SADInterproscan
IPR003156DomainDHHA1 domainInterproscan
IPR009000Homologous_superfamilyTranslation protein, beta-barrel domain superfamilyInterproscan
IPR018164DomainAlanyl-tRNA synthetase, class IIc, N-terminalInterproscan
IPR018165DomainAlanyl-tRNA synthetase, class IIc, core domainInterproscan
IPR018163Homologous_superfamilyThreonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamilyInterproscan
IPR018162Homologous_superfamilyAlanine-tRNA ligase, class IIc, anti-codon-binding domain superfamilyInterproscan
IPR050058FamilyAlanine--tRNA ligaseInterproscan
IPR023033FamilyAlanine-tRNA ligase, eukaryota/bacteriaInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11777ALANYL-TRNA SYNTHETASEInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0004812Molecular Functionaminoacyl-tRNA ligase activityInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0043039Biological ProcesstRNA aminoacylationInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0000166Molecular Functionnucleotide bindingInterproscan
GO:0004813Molecular Functionalanine-tRNA ligase activityInterproscan
GO:0006419Biological Processalanyl-tRNA aminoacylationInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0002161Molecular Functionaminoacyl-tRNA editing activityInterproscan
GO:0005739Cellular ComponentmitochondrionInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K01872AARS, alaS; alanyl-tRNA synthetaseEC:6.1.1.7
Transfer RNA biogenesisko03016deepkoala

TOP