Genomic Location: :...
NR annotation: XP_027054228.1, nucleolar protein 6-like [Pocillopora damicornis]
| CDS | ||||
| Transcript |
| Protein |
| Uniprot term | Description | |||
|---|---|---|---|---|
| Q6NRY2 | Nucleolar protein 6 OS=Xenopus laevis OX=8355 GN=nol6 PE=2 SV=2 | |||
| Q5M7P5 | Nucleolar protein 6 OS=Xenopus tropicalis OX=8364 GN=nol6 PE=2 SV=1 | |||
| Q8R5K4 | Nucleolar protein 6 OS=Mus musculus OX=10090 GN=Nol6 PE=2 SV=2 |
| Gene family | Subfamily |
|---|---|
| Ubiquitin Family | UBD|Other|Beta-prp |
| Ubiquitin Family | E3|E3 adaptor Cullin RING|CDC20 |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF03813 | Nrap | Nrap protein domain 1 | Domain | Interproscan |
| PF17405 | Nrap_D4 | Nrap protein nucleotidyltransferase domain 4 | Domain | Interproscan |
| PF00400 | WD40 | WD domain, G-beta repeat | Repeat | Interproscan |
| PF17407 | Nrap_D6 | Nrap protein domain 6 | Domain | Interproscan |
| PF17404 | Nrap_D3 | Nrap protein domain 3 | Domain | Interproscan |
| PF17406 | Nrap_D5 | Nrap protein PAP/OAS1-like domain 5 | Domain | Interproscan |
| PF17403 | Nrap_D2 | Nrap protein PAP/OAS-like domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR035082 | Domain | Nrap protein domain 1 | Interproscan |
| IPR035369 | Domain | Nrap protein, domain 4 | Interproscan |
| IPR001680 | Repeat | WD40 repeat | Interproscan |
| IPR019775 | Conserved_site | WD40 repeat, conserved site | Interproscan |
| IPR035371 | Domain | Nrap protein, domain 6 | Interproscan |
| IPR020472 | Repeat | G-protein beta WD-40 repeat | Interproscan |
| IPR035368 | Domain | Nrap protein, domain 3 | Interproscan |
| IPR035370 | Domain | Nrap protein, domain 5 | Interproscan |
| IPR005554 | Family | NOL6/Upt22 | Interproscan |
| IPR036322 | Homologous_superfamily | WD40-repeat-containing domain superfamily | Interproscan |
| IPR015943 | Homologous_superfamily | WD40/YVTN repeat-like-containing domain superfamily | Interproscan |
| IPR035367 | Domain | Nrap protein, domain 2 | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR17972 | NUCLEOLAR RNA-ASSOCIATED PROTEIN | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0005515 | Molecular Function | protein binding | Interproscan |
| GO:0006364 | Biological Process | rRNA processing | Interproscan |
| GO:0006409 | Biological Process | tRNA export from nucleus | Interproscan |
| GO:0032040 | Cellular Component | small-subunit processome | Interproscan |
| GO:0032545 | Cellular Component | CURI complex | Interproscan |
| GO:0034456 | Cellular Component | UTP-C complex | Interproscan |
Maintained by Dr. Jiajie She from Prof. Longjun Wu's Lab & Prof. Pei-yuan Qian's Lab
Hong Kong Branch of the Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou)
Hong Kong University of Science and Technology
Clear Water Bay, Kowloon, Hong Kong
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