Gene detail

Detailed information of Cxam_g20909.t1 in Cassiopea xamachana

Genomic Location: :...
NR annotation: MCC6272737.1, deoxyribodipyrimidine photo-lyase [Deltaproteobacteria bacterium]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
A9CJC9	Deoxyribodipyrimidine photo-lyase OS=Agrobacterium fabrum (strain C58 / ATCC 33970) OX=176299 GN=phrA PE=1 SV=1
Q96524	Cryptochrome-2 OS=Arabidopsis thaliana OX=3702 GN=CRY2 PE=1 SV=2
Q43125	Cryptochrome-1 OS=Arabidopsis thaliana OX=3702 GN=CRY1 PE=1 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF03441	FAD_binding_7	FAD binding domain of DNA photolyase	Domain	Interproscan
PF00875	DNA_photolyase	DNA photolyase	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR002081	Family	Cryptochrome/DNA photolyase class 1	Interproscan
IPR036134	Homologous_superfamily	Cryptochrome/DNA photolyase, FAD-binding domain-like superfamily	Interproscan
IPR018394	Conserved_site	Cryptochrome/DNA photolyase class 1, conserved site, C-terminal	Interproscan
IPR036155	Homologous_superfamily	Cryptochrome/photolyase, N-terminal domain superfamily	Interproscan
IPR006050	Domain	DNA photolyase, N-terminal	Interproscan
IPR005101	Domain	Cryptochrome/DNA photolyase, FAD-binding domain	Interproscan
IPR014729	Homologous_superfamily	Rossmann-like alpha/beta/alpha sandwich fold	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11455	CRYPTOCHROME	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003677	Molecular Function	DNA binding	Interproscan
GO:0003904	Molecular Function	deoxyribodipyrimidine photo-lyase activity	Interproscan
GO:0009416	Biological Process	response to light stimulus	Interproscan
GO:0071949	Molecular Function	FAD binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K01669	phr, PHR1; deoxyribodipyrimidine photo-lyase	EC:4.1.99.3	DNA repair and recombination proteins	ko03400	deepkoala