Gene detail

Detailed information of Cxam_g21232.t1 in Cassiopea xamachana

Genomic Location: :...
NR annotation: XP_019853442.1, PREDICTED: fibrinogen C domain-containing protein 1-like isoform X3 [Amphimedon queenslandica]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
Q7ZT75	Ficolin-1-A OS=Xenopus laevis OX=8355 GN=fcn1-a PE=1 SV=2
O00602	Ficolin-1 OS=Homo sapiens OX=9606 GN=FCN1 PE=1 SV=2
P57756	Ficolin-2 OS=Rattus norvegicus OX=10116 GN=Fcn2 PE=2 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00147	Fibrinogen_C	Fibrinogen beta and gamma chains, C-terminal globular domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR002181	Domain	Fibrinogen, alpha/beta/gamma chain, C-terminal globular domain	Interproscan
IPR014716	Homologous_superfamily	Fibrinogen, alpha/beta/gamma chain, C-terminal globular, subdomain 1	Interproscan
IPR050373	Family	Fibrinogen C-terminal domain-containing protein	Interproscan
IPR036056	Homologous_superfamily	Fibrinogen-like, C-terminal	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR19143	FIBRINOGEN/TENASCIN/ANGIOPOEITIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005615	Cellular Component	extracellular space	Interproscan
GO:0062023	Cellular Component	collagen-containing extracellular matrix	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K18159	NDUFAF1, CIA30; NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 1	-	Mitochondrial biogenesis	ko03029	deepkoala