Detailed information of Cxam_g2127.t1 in Cassiopea xamachana

Genomic Location: :...
NR annotation: WP_170328314.1, ribonuclease III [Ruegeria arenilitoris]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q5LNK5Ribonuclease 3 OS=Ruegeria pomeroyi (strain ATCC 700808 / DSM 15171 / DSS-3) OX=246200 GN=rnc PE=3 SV=1
Q16AI6Ribonuclease 3 OS=Roseobacter denitrificans (strain ATCC 33942 / OCh 114) OX=375451 GN=rnc PE=3 SV=1
A8LLD9Ribonuclease 3 OS=Dinoroseobacter shibae (strain DSM 16493 / NCIMB 14021 / DFL 12) OX=398580 GN=rnc PE=3 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF14622Ribonucleas_3_3Ribonuclease-III-likeFamilyInterproscan
PF00035dsrmDouble-stranded RNA binding motifDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR014720DomainDouble-stranded RNA-binding domainInterproscan
IPR036389Homologous_superfamilyRibonuclease III, endonuclease domain superfamilyInterproscan
IPR011907FamilyRibonuclease IIIInterproscan
IPR000999DomainRibonuclease III domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11207RIBONUCLEASE IIIInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0004525Molecular Functionribonuclease III activityInterproscan
GO:0006396Biological ProcessRNA processingInterproscan
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0006364Biological ProcessrRNA processingInterproscan
GO:0003725Molecular Functiondouble-stranded RNA bindingInterproscan
GO:0010468Biological Processregulation of gene expressionInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K03685rnc, DROSHA, RNT1; ribonuclease IIIEC:3.1.26.3
Chromosome and associated proteinsko03036deepkoala

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