Detailed information of Cxam_g21628.t1 in Cassiopea xamachana

Genomic Location: :...
NR annotation: KFP24002.1, U5 small nuclear ribonucleoprotein 200 kDa helicase, partial [Colius striatus]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
O75643U5 small nuclear ribonucleoprotein 200 kDa helicase OS=Homo sapiens OX=9606 GN=SNRNP200 PE=1 SV=2
Q6P4T2U5 small nuclear ribonucleoprotein 200 kDa helicase OS=Mus musculus OX=10090 GN=Snrnp200 PE=1 SV=1
F1LNJ2U5 small nuclear ribonucleoprotein 200 kDa helicase OS=Rattus norvegicus OX=10116 GN=Snrnp200 PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF02889Sec63Sec63 Brl domainFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR004179DomainSec63 domainInterproscan
IPR036388Homologous_superfamilyWinged helix-like DNA-binding domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24075SEC63 DOMAIN-CONTAININGInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0000388Biological Processspliceosome conformational change to release U4 (or U4atac) and U1 (or U11)Interproscan
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0003724Molecular FunctionRNA helicase activityInterproscan
GO:0005681Cellular Componentspliceosomal complexInterproscan

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