Detailed information of Cxam_g22056.t1 in Cassiopea xamachana

Genomic Location: :...
NR annotation: CAG2203350.1, Transposon Ty3-G Gag-Pol polyprotein,Retrovirus-related Pol polyprotein from transposon opus,Retrovirus-related Pol polyprotein from transposon 297,Retrovirus-related Pol polyprotein from transposon 17.6,Transposon Ty3-I Gag-Pol polyprotein [Mytilus edulis]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00665rveIntegrase core domainDomainInterproscan
PF03732Retrotrans_gagRetrotransposon gag protein FamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR052160FamilyGypsy Retrotransposon Integrase-likeInterproscan
IPR036397Homologous_superfamilyRibonuclease H superfamilyInterproscan
IPR001584DomainIntegrase, catalytic coreInterproscan
IPR005162DomainRetrotransposon gag domainInterproscan
IPR016197Homologous_superfamilyChromo-like domain superfamilyInterproscan
IPR000953DomainChromo/chromo shadow domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR47266ENDONUCLEASE-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0015074Biological ProcessDNA integrationInterproscan

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