Detailed information of Cxam_g2242.t1 in Cassiopea xamachana

Genomic Location: :...
NR annotation: WP_170553745.1, isoleucine--tRNA ligase [Ruegeria atlantica]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q5LNR7Isoleucine--tRNA ligase OS=Ruegeria pomeroyi (strain ATCC 700808 / DSM 15171 / DSS-3) OX=246200 GN=ileS PE=3 SV=1
P0C124Isoleucine--tRNA ligase OS=Brucella abortus (strain 2308) OX=359391 GN=ileS PE=3 SV=1
P0C123Isoleucine--tRNA ligase OS=Brucella abortus biovar 1 (strain 9-941) OX=262698 GN=ileS PE=3 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00133tRNA-synt_1tRNA synthetases class I (I, L, M and V)DomainInterproscan
PF08264Anticodon_1Anticodon-binding domain of tRNA ligaseDomainInterproscan
PF06827zf-FPG_IleRSZinc finger found in FPG and IleRSDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR002301FamilyIsoleucine-tRNA ligaseInterproscan
IPR014729Homologous_superfamilyRossmann-like alpha/beta/alpha sandwich foldInterproscan
IPR002300DomainAminoacyl-tRNA synthetase, class IaInterproscan
IPR009008Homologous_superfamilyValyl/Leucyl/Isoleucyl-tRNA synthetase, editing domainInterproscan
IPR009080Homologous_superfamilyAminoacyl-tRNA synthetase, class Ia, anticodon-bindingInterproscan
IPR033708DomainIsoleucyl tRNA synthetase type 1, anticodon-binding domainInterproscan
IPR013155DomainMethionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-bindingInterproscan
IPR010663DomainZinc finger, FPG/IleRS-typeInterproscan
IPR023585FamilyIsoleucine-tRNA ligase, type 1Interproscan
IPR001412Conserved_siteAminoacyl-tRNA synthetase, class I, conserved siteInterproscan
IPR050081FamilyIsoleucine--tRNA ligaseInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR42765SOLEUCYL-TRNA SYNTHETASEInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0000166Molecular Functionnucleotide bindingInterproscan
GO:0004822Molecular Functionisoleucine-tRNA ligase activityInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0006428Biological Processisoleucyl-tRNA aminoacylationInterproscan
GO:0004812Molecular Functionaminoacyl-tRNA ligase activityInterproscan
GO:0006418Biological ProcesstRNA aminoacylation for protein translationInterproscan
GO:0002161Molecular Functionaminoacyl-tRNA editing activityInterproscan
GO:0000049Molecular FunctiontRNA bindingInterproscan
GO:0005829Cellular ComponentcytosolInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K01870IARS, ileS; isoleucyl-tRNA synthetaseEC:6.1.1.5
Transfer RNA biogenesisko03016deepkoala

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