Gene detail

Detailed information of Cxam_g22441.t1 in Cassiopea xamachana

Genomic Location: :...
NR annotation: MCS7167060.1, DEAD/DEAH box helicase [Gemmatales bacterium]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
O53873	DNA 3'-5' helicase XPB OS=Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) OX=83332 GN=XPB PE=1 SV=2
A6WE36	DNA 3'-5' helicase XPB OS=Kineococcus radiotolerans (strain ATCC BAA-149 / DSM 14245 / SRS30216) OX=266940 GN=XPB PE=1 SV=1
Q8SSK1	General transcription and DNA repair factor IIH helicase/translocase subunit XPB OS=Encephalitozoon cuniculi (strain GB-M1) OX=284813 GN=SSL2 PE=3 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13625	Helicase_C_3	Helicase conserved C-terminal domain	Domain	Interproscan
PF16203	ERCC3_RAD25_C	ERCC3/RAD25/XPB C-terminal helicase	Domain	Interproscan
PF04851	ResIII	Type III restriction enzyme, res subunit	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR014001	Domain	Helicase superfamily 1/2, ATP-binding domain	Interproscan
IPR001650	Domain	Helicase, C-terminal domain-like	Interproscan
IPR032830	Domain	Helicase XPB/Ssl2, N-terminal domain	Interproscan
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR050615	Family	ATP-dependent DNA Helicase	Interproscan
IPR032438	Domain	ERCC3/RAD25/XPB helicase, C-terminal domain	Interproscan
IPR006935	Domain	Helicase/UvrB, N-terminal	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11274	RAD25/XP-B DNA REPAIR HELICASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003677	Molecular Function	DNA binding	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0016787	Molecular Function	hydrolase activity	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K10843	ERCC3, XPB; DNA excision repair protein ERCC-3	EC:5.6.2.4	DNA repair and recombination proteins	ko03400	deepkoala