Detailed information of Cxam_g23172.t1 in Cassiopea xamachana

Genomic Location: :...
NR annotation: XP_012556552.2, protocadherin Fat 4 [Hydra vulgaris]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q5DRD0Protocadherin beta-4 OS=Pan troglodytes OX=9598 GN=PCDHB4 PE=3 SV=1
Q9Y5E5Protocadherin beta-4 OS=Homo sapiens OX=9606 GN=PCDHB4 PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF12661hEGFHuman growth factor-like EGFDomainInterproscan
PF00028CadherinCadherin domainDomainInterproscan
PF00008EGFEGF-like domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR013032Conserved_siteEGF-like, conserved siteInterproscan
IPR015919Homologous_superfamilyCadherin-like superfamilyInterproscan
IPR000152PTMEGF-type aspartate/asparagine hydroxylation siteInterproscan
IPR050906FamilyNotch signaling pathwayInterproscan
IPR002126DomainCadherin-likeInterproscan
IPR000742DomainEGF-like domainInterproscan
IPR001881DomainEGF-like calcium-binding domainInterproscan
IPR018097Conserved_siteEGF-like calcium-binding, conserved siteInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24044NOTCH LIGAND FAMILY MEMBERInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005509Molecular Functioncalcium ion bindingInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0005112Molecular FunctionNotch bindingInterproscan
GO:0007156Biological Processhomophilic cell adhesion via plasma membrane adhesion moleculesInterproscan

TOP