Detailed information of Cxam_g23534.t1 in Cassiopea xamachana

Genomic Location: :...
NR annotation: ARJ54249.1, Jun1 [Aurelia aurita]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q9QUM7MutS protein homolog 5 OS=Mus musculus OX=10090 GN=Msh5 PE=1 SV=1
O43196MutS protein homolog 5 OS=Homo sapiens OX=9606 GN=MSH5 PE=1 SV=1
Q6MG62MutS protein homolog 5 OS=Rattus norvegicus OX=10116 GN=Msh5 PE=2 SV=1
Gene familySubfamily
Transcription Factors FamilyTF_bZIP

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00170bZIP_1bZIP transcription factorCoiled-coilInterproscan
PF00488MutS_VMutS domain VDomainInterproscan
PF03957JunJun-like transcription factorFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR004827DomainBasic-leucine zipper domainInterproscan
IPR002112FamilyTranscription factor JunInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR000432DomainDNA mismatch repair protein MutS, C-terminalInterproscan
IPR046347Homologous_superfamilyBasic-leucine zipper domain superfamilyInterproscan
IPR045076FamilyDNA mismatch repair MutS familyInterproscan
IPR005643DomainJun-like transcription factorInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11361DNA MISMATCH REPAIR PROTEIN MUTS FAMILY MEMBERInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003700Molecular FunctionDNA-binding transcription factor activityInterproscan
GO:0006355Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0006298Biological Processmismatch repairInterproscan
GO:0030983Molecular Functionmismatched DNA bindingInterproscan
GO:0003690Molecular Functiondouble-stranded DNA bindingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0051026Biological Processchiasma assemblyInterproscan
GO:0140664Molecular FunctionATP-dependent DNA damage sensor activityInterproscan

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