Gene detail

Detailed information of Cxam_g25347.t1 in Cassiopea xamachana

Genomic Location: :...
NR annotation: NOY74511.1, S1 RNA-binding domain-containing protein [Kiritimatiellota bacterium]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
Q87WQ8	Polyribonucleotide nucleotidyltransferase OS=Pseudomonas syringae pv. tomato (strain ATCC BAA-871 / DC3000) OX=223283 GN=pnp PE=3 SV=1
Q48E81	Polyribonucleotide nucleotidyltransferase OS=Pseudomonas savastanoi pv. phaseolicola (strain 1448A / Race 6) OX=264730 GN=pnp PE=3 SV=1
C3K255	Polyribonucleotide nucleotidyltransferase OS=Pseudomonas fluorescens (strain SBW25) OX=216595 GN=pnp PE=3 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00575	S1	S1 RNA binding domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR012162	Family	Polyribonucleotide nucleotidyltransferase	Interproscan
IPR003029	Domain	S1 domain	Interproscan
IPR012340	Homologous_superfamily	Nucleic acid-binding, OB-fold	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11252	POLYRIBONUCLEOTIDE NUCLEOTIDYLTRANSFERASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0000175	Molecular Function	3'-5'-RNA exonuclease activity	Interproscan
GO:0003723	Molecular Function	RNA binding	Interproscan
GO:0004654	Molecular Function	polyribonucleotide nucleotidyltransferase activity	Interproscan
GO:0005829	Cellular Component	cytosol	Interproscan
GO:0006401	Biological Process	RNA catabolic process	Interproscan
GO:0006402	Biological Process	mRNA catabolic process	Interproscan
GO:0003676	Molecular Function	nucleic acid binding	Interproscan