Gene detail

Detailed information of Cxam_g25685.t1 in Cassiopea xamachana

Genomic Location: :...
NR annotation: NP_001267868.1, carbamoyl-phosphate synthetase/aspartate transcarbamoylase/dihydroorotase [Hydra vulgaris]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
Q91437	Multifunctional protein CAD OS=Squalus acanthias OX=7797 GN=CAD PE=2 SV=1
P05990	Multifunctional protein r OS=Drosophila melanogaster OX=7227 GN=r PE=1 SV=3
P27708	Multifunctional protein CAD OS=Homo sapiens OX=9606 GN=CAD PE=1 SV=3

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF02786	CPSase_L_D2	Carbamoyl-phosphate synthase L chain, ATP binding domain	Domain	Interproscan
PF02142	MGS	MGS-like domain	Domain	Interproscan
PF01979	Amidohydro_1	Amidohydrolase family	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR016185	Homologous_superfamily	Pre-ATP-grasp domain superfamily	Interproscan
IPR005479	Domain	Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain	Interproscan
IPR036897	Homologous_superfamily	Carbamoyl-phosphate synthetase, large subunit oligomerisation domain superfamily	Interproscan
IPR013815	Homologous_superfamily	ATP-grasp fold, subdomain 1	Interproscan
IPR011607	Domain	Methylglyoxal synthase-like domain	Interproscan
IPR032466	Homologous_superfamily	Metal-dependent hydrolase	Interproscan
IPR036914	Homologous_superfamily	Methylglyoxal synthase-like domain superfamily	Interproscan
IPR005483	Domain	Carbamoyl-phosphate synthase large subunit, CPSase domain	Interproscan
IPR011761	Domain	ATP-grasp fold	Interproscan
IPR006680	Domain	Amidohydrolase-related	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11405	CARBAMOYLTRANSFERASE FAMILY MEMBER	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0004088	Molecular Function	carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity	Interproscan
GO:0005737	Cellular Component	cytoplasm	Interproscan
GO:0006541	Biological Process	glutamine metabolic process	Interproscan
GO:0006807	Biological Process	obsolete nitrogen compound metabolic process	Interproscan
GO:0046872	Molecular Function	metal ion binding	Interproscan
GO:0016787	Molecular Function	hydrolase activity	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K01955	carB, CPA2; carbamoyl-phosphate synthase large subunit	EC:6.3.5.5	Alanine, aspartate and glutamate metabolism	ko00250	deepkoala