Detailed information of Cxam_g26223.t1 in Cassiopea xamachana

Genomic Location: :...
NR annotation: XP_029214236.1, vacuolar protein sorting-associated protein 52 homolog [Acropora millepora]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q5TJF0Vacuolar protein sorting-associated protein 52 homolog OS=Canis lupus familiaris OX=9615 GN=VPS52 PE=3 SV=1
O55166Vacuolar protein sorting-associated protein 52 homolog OS=Rattus norvegicus OX=10116 GN=Vps52 PE=1 SV=2
Q8N1B4Vacuolar protein sorting-associated protein 52 homolog OS=Homo sapiens OX=9606 GN=VPS52 PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF04129Vps52_CCVps52/Sac2 family, coiled-coilRepeatInterproscan
PF02931Neur_chan_LBDNeurotransmitter-gated ion-channel ligand binding domainFamilyInterproscan
PF20655Vps52_CVps52, C-terminalRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR007258FamilyVps52Interproscan
IPR048319DomainVps52, coiled-coil domainInterproscan
IPR006202DomainNeurotransmitter-gated ion-channel ligand-binding domainInterproscan
IPR036734Homologous_superfamilyNeurotransmitter-gated ion-channel ligand-binding domain superfamilyInterproscan
IPR048361DomainVps52, C-terminalInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR14190SUPPRESSOR OF ACTIN MUTATIONS 2/VACUOLAR PROTEIN SORTING 52Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0000938Cellular ComponentGARP complexInterproscan
GO:0006896Biological ProcessGolgi to vacuole transportInterproscan
GO:0007041Biological Processlysosomal transportInterproscan
GO:0019905Molecular Functionsyntaxin bindingInterproscan
GO:0032456Biological Processendocytic recyclingInterproscan
GO:0042147Biological Processretrograde transport, endosome to GolgiInterproscan
GO:0005230Molecular Functionextracellular ligand-gated monoatomic ion channel activityInterproscan
GO:0006811Biological Processmonoatomic ion transportInterproscan
GO:0016020Cellular ComponentmembraneInterproscan

TOP