Detailed information of Cxam_g26884.t1 in Cassiopea xamachana

Genomic Location: :...
NR annotation: CAH3125836.1, unnamed protein product [Porites lobata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P51644ADP-ribosylation factor 4 OS=Xenopus laevis OX=8355 GN=arf4 PE=1 SV=2
Q3SZF2ADP-ribosylation factor 4 OS=Bos taurus OX=9913 GN=ARF4 PE=2 SV=3
P84085ADP-ribosylation factor 5 OS=Homo sapiens OX=9606 GN=ARF5 PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00025ArfADP-ribosylation factor familyDomainInterproscan
PF01423LSMLSM domain DomainInterproscan
PF07690MFS_1Major Facilitator SuperfamilyFamilyInterproscan
PF18408zf_HakaiC2H2 Hakai zinc finger domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR034103DomainSm-like protein Lsm8Interproscan
IPR017907Conserved_siteZinc finger, RING-type, conserved siteInterproscan
IPR013083Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR006689FamilySmall GTPase superfamily, ARF/SAR typeInterproscan
IPR040380DomainHAKAI-like, RING finger, HC subclassInterproscan
IPR010920Homologous_superfamilyLSM domain superfamilyInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR045872FamilyADP-ribosylation factor 1-5Interproscan
IPR036259Homologous_superfamilyMFS transporter superfamilyInterproscan
IPR001841DomainZinc finger, RING-typeInterproscan
IPR001163DomainSm domain, eukaryotic/archaea-typeInterproscan
IPR024156FamilySmall GTPase superfamily, ARF typeInterproscan
IPR011701FamilyMajor facilitator superfamilyInterproscan
IPR047575DomainSm domainInterproscan
IPR041042DomainHakai, C2H2 zinc finger domainInterproscan
IPR005225DomainSmall GTP-binding protein domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11711ADP RIBOSYLATION FACTOR-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0000398Biological ProcessmRNA splicing, via spliceosomeInterproscan
GO:0005688Cellular ComponentU6 snRNPInterproscan
GO:0046540Cellular ComponentU4/U6 x U5 tri-snRNP complexInterproscan
GO:0003924Molecular FunctionGTPase activityInterproscan
GO:0005525Molecular FunctionGTP bindingInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0005886Cellular Componentplasma membraneInterproscan
GO:0006886Biological Processintracellular protein transportInterproscan
GO:0016192Biological Processvesicle-mediated transportInterproscan
GO:0022857Molecular Functiontransmembrane transporter activityInterproscan
GO:0055085Biological Processtransmembrane transportInterproscan
GO:0003723Molecular FunctionRNA bindingInterproscan

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