Gene detail

Detailed information of Cxam_g27393.t1 in Cassiopea xamachana

Genomic Location: :...
NR annotation: AQZ26747.1, lactate dehydrogenase [Aurelia sp. 1 GW-2014]

Gene Structure

Sequence

Uniprot

Gene family

Uniprot term	Description
F1QXM5	Probable D-lactate dehydrogenase, mitochondrial OS=Danio rerio OX=7955 GN=ldhd PE=2 SV=1
Q7TNG8	Probable D-lactate dehydrogenase, mitochondrial OS=Mus musculus OX=10090 GN=Ldhd PE=1 SV=1
Q86WU2	Probable D-lactate dehydrogenase, mitochondrial OS=Homo sapiens OX=9606 GN=LDHD PE=1 SV=1

Gene family	Subfamily
Ubiquitin Family	DUB\|USP\|USP

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00443	UCH	Ubiquitin carboxyl-terminal hydrolase	Family	Interproscan
PF02913	FAD-oxidase_C	FAD linked oxidases, C-terminal domain	Domain	Interproscan
PF01565	FAD_binding_4	FAD binding domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR016164	Homologous_superfamily	FAD-linked oxidase-like, C-terminal	Interproscan
IPR036318	Homologous_superfamily	FAD-binding, type PCMH-like superfamily	Interproscan
IPR016169	Homologous_superfamily	FAD-binding, type PCMH, subdomain 2	Interproscan
IPR018200	Conserved_site	Ubiquitin specific protease, conserved site	Interproscan
IPR038765	Homologous_superfamily	Papain-like cysteine peptidase superfamily	Interproscan
IPR016171	Homologous_superfamily	Vanillyl-alcohol oxidase, C-terminal subdomain 2	Interproscan
IPR016166	Domain	FAD-binding domain, PCMH-type	Interproscan
IPR001394	Domain	Peptidase C19, ubiquitin carboxyl-terminal hydrolase	Interproscan
IPR028889	Domain	Ubiquitin specific protease domain	Interproscan
IPR004113	Domain	FAD-binding oxidoreductase/transferase, type 4, C-terminal	Interproscan
IPR006094	Domain	FAD linked oxidase, N-terminal	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11748	D-LACTATE DEHYDROGENASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003824	Molecular Function	catalytic activity	Interproscan
GO:0050660	Molecular Function	flavin adenine dinucleotide binding	Interproscan
GO:0004458	Molecular Function	D-lactate dehydrogenase (cytochrome) activity	Interproscan
GO:0005739	Cellular Component	mitochondrion	Interproscan
GO:0008720	Molecular Function	D-lactate dehydrogenase activity	Interproscan
GO:1903457	Biological Process	lactate catabolic process	Interproscan
GO:0004843	Molecular Function	cysteine-type deubiquitinase activity	Interproscan
GO:0071949	Molecular Function	FAD binding	Interproscan
GO:0016579	Biological Process	protein deubiquitination	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K00102	LDHD, dld; D-lactate dehydrogenase (cytochrome)	EC:1.1.2.4	Pyruvate metabolism	ko00620	deepkoala