Gene detail

Detailed information of Cxam_g27597.t1 in Cassiopea xamachana

Genomic Location: :...
NR annotation: XP_047140746.1, nuclear cap-binding protein subunit 1 [Hydra vulgaris]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
Q6GQ80	Nuclear cap-binding protein subunit 1-A OS=Xenopus laevis OX=8355 GN=ncbp1-a PE=2 SV=1
Q6DIE2	Nuclear cap-binding protein subunit 1 OS=Xenopus tropicalis OX=8364 GN=ncbp1 PE=2 SV=1
C0H906	Nuclear cap-binding protein subunit 1 OS=Salmo salar OX=8030 GN=ncbp1 PE=2 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF02854	MIF4G	MIF4G domain	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR016024	Homologous_superfamily	Armadillo-type fold	Interproscan
IPR027159	Family	Nuclear cap-binding protein subunit 1	Interproscan
IPR003890	Domain	MIF4G-like, type 3	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12412	CAP BINDING PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0000184	Biological Process	nuclear-transcribed mRNA catabolic process, nonsense-mediated decay	Interproscan
GO:0000339	Molecular Function	RNA cap binding	Interproscan
GO:0003729	Molecular Function	mRNA binding	Interproscan
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0005845	Cellular Component	obsolete mRNA cap binding complex	Interproscan
GO:0005846	Cellular Component	nuclear cap binding complex	Interproscan
GO:0006406	Biological Process	mRNA export from nucleus	Interproscan
GO:0003723	Molecular Function	RNA binding	Interproscan
GO:0005515	Molecular Function	protein binding	Interproscan