Detailed information of Cxam_g27845.t1 in Cassiopea xamachana

Genomic Location: :...
NR annotation: XP_002156611.1, signal recognition particle 19 kDa protein [Hydra vulgaris]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
P49963Signal recognition particle 19 kDa protein OS=Drosophila melanogaster OX=7227 GN=Srp19 PE=2 SV=2
Q9D7A6Signal recognition particle 19 kDa protein OS=Mus musculus OX=10090 GN=Srp19 PE=1 SV=1
P09132Signal recognition particle 19 kDa protein OS=Homo sapiens OX=9606 GN=SRP19 PE=1 SV=3
Gene familySubfamily
Transcription Factors Familyzf-C2H2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00096zf-C2H2Zinc finger, C2H2 typeDomainInterproscan
PF13912zf-C2H2_6C2H2-type zinc fingerDomainInterproscan
PF01922SRP19SRP19 proteinFamilyInterproscan
PF12874zf-metZinc-finger of C2H2 typeDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR013087DomainZinc finger C2H2-typeInterproscan
IPR036521Homologous_superfamilySignal recognition particle, subunit SRP19-like superfamilyInterproscan
IPR036236Homologous_superfamilyZinc finger C2H2 superfamilyInterproscan
IPR002778FamilySignal recognition particle, SRP19 subunitInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24390ZINC FINGER PROTEINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0006614Biological ProcessSRP-dependent cotranslational protein targeting to membraneInterproscan
GO:0008312Molecular Function7S RNA bindingInterproscan
GO:0048500Cellular Componentsignal recognition particleInterproscan
GO:0000978Molecular FunctionRNA polymerase II cis-regulatory region sequence-specific DNA bindingInterproscan
GO:0003700Molecular FunctionDNA-binding transcription factor activityInterproscan
GO:0006357Biological Processregulation of transcription by RNA polymerase IIInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K09228KRAB; KRAB domain-containing zinc finger protein-Transcription factorsko03000deepkoala

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