Detailed information of Cxam_g28389.t1 in Cassiopea xamachana

Genomic Location: :...
NR annotation: WP_170430770.1, sensor histidine kinase [Ruegeria arenilitoris]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q9HV32Response regulator protein PmrA OS=Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1) OX=208964 GN=pmrA PE=1 SV=1
Q8ZLZ9Sensor protein QseC OS=Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) OX=99287 GN=qseC PE=3 SV=1
Q8Z3P2Sensor protein QseC OS=Salmonella typhi OX=90370 GN=qseC PE=3 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00486Trans_reg_CTranscriptional regulatory protein, C terminalDomainInterproscan
PF085212CSK_NTwo-component sensor kinase N-terminalFamilyInterproscan
PF00072Response_regResponse regulator receiver domainDomainInterproscan
PF00512HisKAHis Kinase A (phospho-acceptor) domainDomainInterproscan
PF02518HATPase_cHistidine kinase-, DNA gyrase B-, and HSP90-like ATPaseDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001867DomainOmpR/PhoB-type DNA-binding domainInterproscan
IPR005467DomainHistidine kinase domainInterproscan
IPR013727DomainTwo-component sensor kinase, N-terminalInterproscan
IPR036890Homologous_superfamilyHistidine kinase/HSP90-like ATPase superfamilyInterproscan
IPR011006Homologous_superfamilyCheY-like superfamilyInterproscan
IPR003661DomainSignal transduction histidine kinase, dimerisation/phosphoacceptor domainInterproscan
IPR001789DomainSignal transduction response regulator, receiver domainInterproscan
IPR036097Homologous_superfamilySignal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamilyInterproscan
IPR050428FamilyTwo-component system sensor histidine kinaseInterproscan
IPR003594DomainHistidine kinase/HSP90-like ATPaseInterproscan
IPR003660DomainHAMP domainInterproscan
IPR036388Homologous_superfamilyWinged helix-like DNA-binding domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR45436SENSOR HISTIDINE KINASE YKOHInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0000160Biological Processphosphorelay signal transduction systemInterproscan
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0006355Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0000155Molecular Functionphosphorelay sensor kinase activityInterproscan
GO:0007165Biological Processsignal transductionInterproscan
GO:0005886Cellular Componentplasma membraneInterproscan
GO:0016020Cellular ComponentmembraneInterproscan

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