Gene detail

Detailed information of Cxam_g2903.t1 in Cassiopea xamachana

Genomic Location: :...
NR annotation: WP_170405032.1, histone deacetylase family protein [Ruegeria arenilitoris]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
Q2QWU2	Histone deacetylase 10, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=HDAC10 PE=1 SV=1
Q941D6	Histone deacetylase 14, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=HDA14 PE=1 SV=1
P72702	Uncharacterized protein slr0245 OS=Synechocystis sp. (strain ATCC 27184 / PCC 6803 / Kazusa) OX=1111708 GN=slr0245 PE=3 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00850	Hist_deacetyl	Histone deacetylase domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR037138	Homologous_superfamily	Histone deacetylase domain superfamily	Interproscan
IPR000286	Family	Histone deacetylase family	Interproscan
IPR023696	Homologous_superfamily	Ureohydrolase domain superfamily	Interproscan
IPR050284	Family	Histone deacetylase and polyamine deacetylase	Interproscan
IPR023801	Domain	Histone deacetylase domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10625	HISTONE DEACETYLASE HDAC1-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0000122	Biological Process	negative regulation of transcription by RNA polymerase II	Interproscan
GO:0004407	Molecular Function	histone deacetylase activity	Interproscan
GO:0008134	Molecular Function	transcription factor binding	Interproscan
GO:0016575	Biological Process	obsolete histone deacetylation	Interproscan