Detailed information of Cxam_g3401.t1 in Cassiopea xamachana

Genomic Location: :...
NR annotation: WP_170326689.1, PAS-domain containing protein [Ruegeria arenilitoris]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P62722Regulatory protein VirG OS=Agrobacterium tumefaciens (strain 15955) OX=190386 GN=virG PE=3 SV=1
Q44444Regulatory protein VirG OS=Rhizobium radiobacter OX=358 GN=virG PE=3 SV=2
P07545Regulatory protein VirG OS=Agrobacterium fabrum (strain C58 / ATCC 33970) OX=176299 GN=virG PE=3 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF08448PAS_4PAS foldDomainInterproscan
PF02518HATPase_cHistidine kinase-, DNA gyrase B-, and HSP90-like ATPaseDomainInterproscan
PF00072Response_regResponse regulator receiver domainDomainInterproscan
PF12860PAS_7PAS foldDomainInterproscan
PF00486Trans_reg_CTranscriptional regulatory protein, C terminalDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001789DomainSignal transduction response regulator, receiver domainInterproscan
IPR001867DomainOmpR/PhoB-type DNA-binding domainInterproscan
IPR036890Homologous_superfamilyHistidine kinase/HSP90-like ATPase superfamilyInterproscan
IPR036097Homologous_superfamilySignal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamilyInterproscan
IPR036388Homologous_superfamilyWinged helix-like DNA-binding domain superfamilyInterproscan
IPR005467DomainHistidine kinase domainInterproscan
IPR035965Homologous_superfamilyPAS domain superfamilyInterproscan
IPR011006Homologous_superfamilyCheY-like superfamilyInterproscan
IPR013656DomainPAS fold-4Interproscan
IPR003594DomainHistidine kinase/HSP90-like ATPaseInterproscan
IPR016032Homologous_superfamilySignal transduction response regulator, C-terminal effectorInterproscan
IPR003661DomainSignal transduction histidine kinase, dimerisation/phosphoacceptor domainInterproscan
IPR004358DomainSignal transduction histidine kinase-related protein, C-terminalInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR43065SENSOR HISTIDINE KINASEInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0000160Biological Processphosphorelay signal transduction systemInterproscan
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0006355Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0000155Molecular Functionphosphorelay sensor kinase activityInterproscan
GO:0007165Biological Processsignal transductionInterproscan
GO:0016310Biological ProcessphosphorylationInterproscan
GO:0016772Molecular Functiontransferase activity, transferring phosphorus-containing groupsInterproscan

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