Detailed information of Cxam_g3912.t1 in Cassiopea xamachana

Genomic Location: :...
NR annotation: KAJ8261078.1, hypothetical protein COCON_G00168010 [Conger conger]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q80VW5Whirlin OS=Mus musculus OX=10090 GN=Whrn PE=1 SV=3
Q810W9Whirlin OS=Rattus norvegicus OX=10116 GN=Whrn PE=1 SV=1
Q9P202Whirlin OS=Homo sapiens OX=9606 GN=WHRN PE=1 SV=4

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00595PDZPDZ domainDomainInterproscan
PF09631Sen15Sen15 proteinDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001478DomainPDZ domainInterproscan
IPR036034Homologous_superfamilyPDZ superfamilyInterproscan
IPR036167Homologous_superfamilytRNA intron endonuclease, catalytic domain-like superfamilyInterproscan
IPR051844FamilySensory Perception USH2 Complex ProteinInterproscan
IPR018593DomaintRNA-splicing endonuclease subunit Sen15Interproscan
IPR011856Homologous_superfamilytRNA endonuclease-like domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR23116PDZ DOMAIN CONTAINING WHIRLIN AND HARMONIN-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0006388Biological ProcesstRNA splicing, via endonucleolytic cleavage and ligationInterproscan
GO:0002142Cellular Componentstereocilia ankle link complexInterproscan
GO:0005886Cellular Componentplasma membraneInterproscan
GO:0005929Cellular ComponentciliumInterproscan
GO:0032426Cellular Componentstereocilium tipInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan

TOP